Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0963 ATGCACAATGTTAGATTTTACACATACAAAGAGCTAAAATTTGCAACTGAAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGCGGTTTTGGTTCTGTCTACAAGGGAAAGCTAAGAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCGGCTGAATCAAGACAAGGATTGAAGGAATTCTTGACAGAAATAAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATTCTTGTCTACAATTACCTTGAGAACAATAGCCTTGCACAAACTCTTCTCGGGCGAGGCTACAGTAGCATCCAGTTTGATTGGCGAACAAGGTCTAAGATTTGCGTTGGAATTGCACGGGGGCTTGCCTTCCTTCACGAGGATGTACAGCCACATATCATTCATAGAGATATCAAAGCAAGTAACATTCTTCTTGACCGTGACCTCACTCCTAAAATTTCAGATTTTGGTCTCGCGAAGCTTATTCCAGCCAGCATGACTCACGTCAGTACCCGAGTGGCAGGAACAATTGGCTACCTGGCACCAGAATATGCAATAAGAGGGCAGGTGACGAGAAAATCAGATATTTACAGTTTCGGGGTCCTCCTTGTGGAAATAGTCAGCGGGAGATGCAATACAAATACGCAGTTACCAATTGGAGAGCAATACCTTCTCGAAAGGACATGGAATCTTTATGAGCGAGGAGAGCTCGTTCTGCTAGTAGATATGTCGTTAAACGGCGACTTTGATGCTGAGGAGGCTTGTAAATATCTAAAGATTGGCCTACTTTGCACGCAAGACAGTCCGAAGCTCCGTCCATCAATGTCGACTGTGGTAAAGATGCTAACGGGCGAGATCAGTATCGAAGATAGAAAGATAACGAAACCGGGGCTGATTTCTGACTTCATGGATCTTAAAGTAAAGATTCCAGAGAAAAAGAAAGGGAATGGAGAGGGAGTATCTTCTGATAGTCTGTCCTCTGGATCAAACATCCTTGGAAACTCAACAATGTCATCTGAAACCTCAACTATTACAACTGCAACCTTCACTGCACAATATGACAGGAACACTTTCTCATCTGTACTGTGA 1113 42.77 MHNVRFYTYKELKFATEDFSLANKIGEGGFGSVYKGKLRDGKIAAIKVLSAESRQGLKEFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGYSSIQFDWRTRSKICVGIARGLAFLHEDVQPHIIHRDIKASNILLDRDLTPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTQLPIGEQYLLERTWNLYERGELVLLVDMSLNGDFDAEEACKYLKIGLLCTQDSPKLRPSMSTVVKMLTGEISIEDRKITKPGLISDFMDLKVKIPEKKKGNGEGVSSDSLSSGSNILGNSTMSSETSTITTATFTAQYDRNTFSSVL 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9379165 9383535 - Tan0006537.2 Tan01g0963 738387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0963 370 Gene3D Transferase(Phosphotransferase) domain 1 95 303 - -
Tan01g0963 370 Gene3D Phosphorylase Kinase; domain 1 1 94 - -
Tan01g0963 370 MobiDBLite consensus disorder prediction 321 345 - -
Tan01g0963 370 CDD STKc_IRAK 25 292 - -
Tan01g0963 370 ProSiteProfiles Protein kinase domain profile. 19 296 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0963 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0963 370 SMART serkin_6 19 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0963 370 FunFam cold-responsive protein kinase 1 1 94 - -
Tan01g0963 370 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524(InterPro)
Tan01g0963 370 MobiDBLite consensus disorder prediction 327 345 - -
Tan01g0963 370 Pfam Protein kinase domain 21 287 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0963 370 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Tan01g0963 370 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 4 323 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Tan01g0963 370 FunFam cold-responsive protein kinase 1 95 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0963 Tan-Chr1:9379165 Tan03g1053 Tan-Chr3:66800024 2.10E-98 dispersed
Tan01g0962 Tan-Chr1:9379165 Tan01g0963 Tan-Chr1:9379165 3.20E-209 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67007 PF00069 Pkinase 1.50E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0963 - - - 0.0