Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0973 ATGGAGTTGGTGAAGAAGAAGAAGAAGATGATGAAGCTGGTTTTGTTGATTACAGTTCCAGTTATGGTGATTGTGATATTACAGAGATTTTGGATGCCATCTTTGGACTTTAATCAGTTCTGGAAAACTGTTGCTCAACATGGCTCCACAAACGATTCTCCCAAAAACGACGACAAGTTCATCAATGGCCTTCTTCCTCCAGGCTTCAATGGAAAATCCTGCTTAAGCCGATACCAATTAAACCTCTACAGAAAACCCTCCCCCCACAAGCCCTCTTCCTTTCTCCTCTCAAAACTCCGCCGTTACGAAGCCCTCCACCGCCGCTGCGGCCCCAATTCCCCCTCCTTCAACCGAGCCCTCGCCGGTCTCTCCTCATCCACAAACTCCACACCCCCGCCGGATGATTGCAAATACGCCGTCATTCTCACCCGCGACGGCCTCGGCAACCGGATCCTCGCCATCATCTCTGCCTTCTTCTACGCCCTGATCTCCGATCGTGTCCTTCTAATCGACCGAGGCAACGCTCTCGATGACCTCTTCTGCGAGCCCTTTCTCGGATCCTCGTGGCTTCTGCCGTCGGATTTCCCGCTCCGCCGCGAATTTGGCTCGTTCCGCCAGTCCTTCCCTGGGTCCTTCGGCAACGTTTTGAGAAATGGGGTGTTGAAGAAAACAATCCAAGATTCGCCTCCGGCTTATTTGTATCTTCATCTCTCTCATGACGCCGGCGATTACGATAAGCTCTTTTACTGCGACCGGCAGCAGAGTCTTGTCAAGAATGTCCCATGGCTGATTATGGAGACGAATAACTATCTGGTTCCTGGATTTTTTCTCGTTCCTTCTTTCAGAGAAGAGCTTGAGAAGCTCTTTCCGAAGAAGGACACCGTGTTCCACCATCTCGGTCGGTACCTCTTCCACCCGACCAACGGCGTCTGGGGGCTGATTTCGAGATCTTACAAGCCGTATCTCGCCAGAGCGAACGAAATGGTCGGGATTCAGATTCGGGTTTTTGGGTCGGAATCCGGGTCGGTTCAGGACCAGATGAATCAGCTTCTGGCTTGCACACAGAAGAAGAAATTACTGCCGGAGGTCGAGTCGTCGTCGCCGGAGAAGACGAATTCCACCACTTCTCAGAAAGTGAAAGTAGTGCTGGTGACGTCTCTGAGCTCGCAGTACTCGGAAACCCTAAAGGACATGTACTTGGAGCATCCGGCCGTCGACGGGGAGGTGGTGGCGGTGTACCAGCCGAGCCACGAGGGGGTTCAGAGCTCCGACAAGACGCTGCACAACCGGAAGGCGCTAGCGGAGATGTACCTTCTGAGCCTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTGGCGCAGGGGCTGGCCGGAGTGAAGCCATGGATGCTGTACAAGGCCGAGGAGAAGGTGTTTTGGGCGATGCATTCATGGCTGCAGTACAGAACGAGGAAGGAGACGGGCGATGACTGGCCTTGCCGGCGGGCGGTGTCGATGGAGCCGTGCTTCCACACGCCGCCGGTGTGCGATTGCGATGAGATGAAGAGAAGAGATGGAGGAAATGTTTTTCCATTTGTGACGCATTGTGAAGATGCGAGTTGGGGCCTAAAGTTGGTTGACAGAGATTAG 1641 53.56 MELVKKKKKMMKLVLLITVPVMVIVILQRFWMPSLDFNQFWKTVAQHGSTNDSPKNDDKFINGLLPPGFNGKSCLSRYQLNLYRKPSPHKPSSFLLSKLRRYEALHRRCGPNSPSFNRALAGLSSSTNSTPPPDDCKYAVILTRDGLGNRILAIISAFFYALISDRVLLIDRGNALDDLFCEPFLGSSWLLPSDFPLRREFGSFRQSFPGSFGNVLRNGVLKKTIQDSPPAYLYLHLSHDAGDYDKLFYCDRQQSLVKNVPWLIMETNNYLVPGFFLVPSFREELEKLFPKKDTVFHHLGRYLFHPTNGVWGLISRSYKPYLARANEMVGIQIRVFGSESGSVQDQMNQLLACTQKKKLLPEVESSSPEKTNSTTSQKVKVVLVTSLSSQYSETLKDMYLEHPAVDGEVVAVYQPSHEGVQSSDKTLHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEEKVFWAMHSWLQYRTRKETGDDWPCRRAVSMEPCFHTPPVCDCDEMKRRDGGNVFPFVTHCEDASWGLKLVDRD 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9484535 9486955 - Tan0000780.1 Tan01g0973 738397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0973 546 PANTHER FUCOSYLTRANSFERASE 2-RELATED 7 544 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Tan01g0973 546 Gene3D - 316 479 - -
Tan01g0973 546 FunFam Galactoside 2-alpha-L-fucosyltransferase 134 185 - -
Tan01g0973 546 Gene3D - 134 182 - -
Tan01g0973 546 Pfam Xyloglucan fucosyltransferase 47 515 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0973 Tan-Chr1:9484535 Tan05g2424 Tan-Chr5:75408324 1.30E-147 dispersed
Tan01g0973 Tan-Chr1:9484535 Tan04g1055 Tan-Chr4:9399811 9.70E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0973 K13681 - csv:101222105 885.56