Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1007 ATGGCGGCCACTTCCCTTTCGAATCTGCCTTCTGCTGTCTTCCATGGAAATCTGCAGATAAATGAATTTGGGTTTGTGGGTATGCCGAGACAAGCCGCCAAGTATCTCAAATCCAATCTTAGAGGTCCGGTTGTTAGATGTCAATCAACTCAAGTTGATGAACCCAAAACAAAAAGAAATCTACTCGACAATGCGAGCAATCTTCTTACTAATTTGTTAAGTGGTGGAAATCTGGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTCGGTCGCGCACTATTTTTTGCACTATATGACTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCCATTGTGGCAAGATATATTCTTCGAGAAAATGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCGGCTGACCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGGCCAAAGTGTTTACTGATTGTTCAGAACGATCAATACTGAAGTTGGAGAAGCTTTTAGGAGAAGGTGAACTTCAGGAGGATAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTTACCAAAGAATCCCCGGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATATTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAGTTCCATAGTGACCTTAAGGTTATTAACGACTGTCTTGATGGCCTGATACGAAACGCTAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAGTTGCAGCAAAGGGACTATTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGAGCTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCTGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAAAGCTCAAGAAGAGATTGATTTGGTTCTTGGCGAGGGGAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATTGTTGCAGAGACTCTTAGATTGTTTCCTCAGCCACCATTGCTAATAAGACGAGCTCTCAAACCGGATACATTACCAGGAGGATACAATGGTGACAAAAATGGATATGCAATTCCTGCAGGGACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGATAACCCTCAAGAATTTGAACCAGAGAGATTTCAGGTAAAGAGAGCGAGCGAGGGAATCGAAGGATGGGATGGTTTCGACCCATCTAGAAGCCCTGGAGCTCTATACCCGAACGAGATCGTATCAGACTTTTCCTTCTTGCCATTTGGTGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTTTGATGGAGTCAACTATAGCACTGGCCATGTTGCTGCAGAAGTTTGATGTGGAATTAAAAGGAAGTCCAGAATCTGTGGAACTAGTTACTGGGGCCACTATACATACCAAAAGTGGGTTGTGGTGCAAACTGAGAAGAAGATCACAAGTAAAGTGA 1737 42.72 MAATSLSNLPSAVFHGNLQINEFGFVGMPRQAAKYLKSNLRGPVVRCQSTQVDEPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRALFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMAKVFTDCSERSILKLEKLLGEGELQEDKTIELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQEEIDLVLGEGRPTFELLKGLKYIRLIVAETLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWDNPQEFEPERFQVKRASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELKGSPESVELVTGATIHTKSGLWCKLRRRSQVK 578
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 9707404 9726712 - Tan0000601.1 Tan01g1007 738431
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1007 578 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PRINTS P450 superfamily signature 355 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PRINTS P450 superfamily signature 521 532 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PRINTS P450 superfamily signature 512 521 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 Gene3D Cytochrome P450 80 578 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PANTHER CYTOCHROME P450 FAMILY 4 70 574 IPR050196 GO:0009507(PANTHER)
Tan01g1007 578 PRINTS E-class P450 group I signature 344 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PRINTS E-class P450 group I signature 511 521 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PRINTS E-class P450 group I signature 364 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 PRINTS E-class P450 group I signature 521 544 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 CDD CYP97 98 568 - -
Tan01g1007 578 SUPERFAMILY Cytochrome P450 93 574 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1007 578 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 514 523 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan01g1007 578 Pfam Cytochrome P450 104 564 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1007 Tan-Chr1:9707404 Tan01g1451 Tan-Chr1:14615191 3.70E-121 dispersed
Tan01g1007 Tan-Chr1:9707404 Tan01g1008 Tan-Chr1:9707404 1.40E-250 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1007 K24543 - csv:101210292 1059.28