Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g1007 | ATGGCGGCCACTTCCCTTTCGAATCTGCCTTCTGCTGTCTTCCATGGAAATCTGCAGATAAATGAATTTGGGTTTGTGGGTATGCCGAGACAAGCCGCCAAGTATCTCAAATCCAATCTTAGAGGTCCGGTTGTTAGATGTCAATCAACTCAAGTTGATGAACCCAAAACAAAAAGAAATCTACTCGACAATGCGAGCAATCTTCTTACTAATTTGTTAAGTGGTGGAAATCTGGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTCGGTCGCGCACTATTTTTTGCACTATATGACTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCCATTGTGGCAAGATATATTCTTCGAGAAAATGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCGGCTGACCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGGCCAAAGTGTTTACTGATTGTTCAGAACGATCAATACTGAAGTTGGAGAAGCTTTTAGGAGAAGGTGAACTTCAGGAGGATAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTTACCAAAGAATCCCCGGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATATTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAGTTCCATAGTGACCTTAAGGTTATTAACGACTGTCTTGATGGCCTGATACGAAACGCTAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAGTTGCAGCAAAGGGACTATTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGAGCTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCTGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAAAGCTCAAGAAGAGATTGATTTGGTTCTTGGCGAGGGGAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATTGTTGCAGAGACTCTTAGATTGTTTCCTCAGCCACCATTGCTAATAAGACGAGCTCTCAAACCGGATACATTACCAGGAGGATACAATGGTGACAAAAATGGATATGCAATTCCTGCAGGGACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGATAACCCTCAAGAATTTGAACCAGAGAGATTTCAGGTAAAGAGAGCGAGCGAGGGAATCGAAGGATGGGATGGTTTCGACCCATCTAGAAGCCCTGGAGCTCTATACCCGAACGAGATCGTATCAGACTTTTCCTTCTTGCCATTTGGTGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTTTGATGGAGTCAACTATAGCACTGGCCATGTTGCTGCAGAAGTTTGATGTGGAATTAAAAGGAAGTCCAGAATCTGTGGAACTAGTTACTGGGGCCACTATACATACCAAAAGTGGGTTGTGGTGCAAACTGAGAAGAAGATCACAAGTAAAGTGA | 1737 | 42.72 | MAATSLSNLPSAVFHGNLQINEFGFVGMPRQAAKYLKSNLRGPVVRCQSTQVDEPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRALFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMAKVFTDCSERSILKLEKLLGEGELQEDKTIELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQEEIDLVLGEGRPTFELLKGLKYIRLIVAETLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWDNPQEFEPERFQVKRASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELKGSPESVELVTGATIHTKSGLWCKLRRRSQVK | 578 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 9707404 | 9726712 | - | Tan0000601.1 | Tan01g1007 | 738431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g1007 | 578 | PRINTS | P450 superfamily signature | 407 | 418 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PRINTS | P450 superfamily signature | 355 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PRINTS | P450 superfamily signature | 521 | 532 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PRINTS | P450 superfamily signature | 512 | 521 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | Gene3D | Cytochrome P450 | 80 | 578 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PANTHER | CYTOCHROME P450 FAMILY 4 | 70 | 574 | IPR050196 | GO:0009507(PANTHER) | |
| Tan01g1007 | 578 | PRINTS | E-class P450 group I signature | 344 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PRINTS | E-class P450 group I signature | 511 | 521 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PRINTS | E-class P450 group I signature | 104 | 123 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PRINTS | E-class P450 group I signature | 364 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | PRINTS | E-class P450 group I signature | 521 | 544 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | CDD | CYP97 | 98 | 568 | - | - | |
| Tan01g1007 | 578 | SUPERFAMILY | Cytochrome P450 | 93 | 574 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1007 | 578 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 514 | 523 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g1007 | 578 | Pfam | Cytochrome P450 | 104 | 564 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1007 | Tan-Chr1:9707404 | Tan01g1451 | Tan-Chr1:14615191 | 3.70E-121 | dispersed | |
| Tan01g1007 | Tan-Chr1:9707404 | Tan01g1008 | Tan-Chr1:9707404 | 1.40E-250 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g1007 | K24543 | - | csv:101210292 | 1059.28 |