Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1008 ATGGCGGCCACTTCCCTTTCGAATCTGCCTTCTGCTGTCTTCCATGGAAATCTGCAGATAAATGAATTTGGGTTTGTGGGTATGCCGAGACAAGCCGCCAAGTATCTCAAATCCAATCTTAGAGGTCCGGTTGTTAGATGTCAATCAACTCAAGTTGATGAACCCAAAACAAAAAGAAATCTACTCGACAATGCGAGCAATCTTCTTACTAATTTGTTAAGTGGTGGAAATCTGGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTCGGTCGCGCACTATTTTTTGCACTATATGACTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCCATTGTGGCAAGATATATTCTTCGAGAAAATGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCGGCTGACCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGGCCAAAGTGTTTACTGATTGTTCAGAACGATCAATACTGAAGTTGGAGAAGCTTTTAGGAGAAGGTGAACTTCAGGAGGATAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTTACCAAAGAATCCCCGGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATATTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAGTTCCATAGTGACCTTAAGGTTATTAACGACTGTCTTGATGGCCTGATACGAAACGCTAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAGTTGCAGCAAAGGGACTATTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGAGCTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCTGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAAAGCTCAAGAAGAGATTGATTTGGTTCTTGGCGAGGGGAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATTGTTGCAGAGACTCTTAGATTGTTTCCTCAGCCACCATTGCTAATAAGACGAGCTCTCAAACCGGATACATTACCAGGTATTAACTGA 1311 42.11 MAATSLSNLPSAVFHGNLQINEFGFVGMPRQAAKYLKSNLRGPVVRCQSTQVDEPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRALFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMAKVFTDCSERSILKLEKLLGEGELQEDKTIELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQEEIDLVLGEGRPTFELLKGLKYIRLIVAETLRLFPQPPLLIRRALKPDTLPGIN 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9707404 9726712 - Tan0000601.2 Tan01g1008 738432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1008 436 Gene3D Cytochrome P450 80 436 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 SUPERFAMILY Cytochrome P450 93 434 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 PRINTS E-class P450 group I signature 344 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 PRINTS E-class P450 group I signature 406 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 PRINTS E-class P450 group I signature 364 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 PRINTS P450 superfamily signature 355 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1008 436 PANTHER CYTOCHROME P450 FAMILY 4 70 431 IPR050196 GO:0009507(PANTHER)
Tan01g1008 436 Pfam Cytochrome P450 104 434 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1008 Tan-Chr1:9707404 Tan01g1451 Tan-Chr1:14615191 4.80E-89 dispersed
Tan01g1007 Tan-Chr1:9707404 Tan01g1008 Tan-Chr1:9707404 1.40E-250 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1008 K24543 - csv:101210292 765.763