Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g1024 | ATGCTTGTTTTCGTCGCCCTCGTCTTCTTCTTCTTCATCTTCCTCTTCTTTCATTCTCTCTTCAAATTCTCCTCCCTCGCTCGCCGGAAACTTCCCCTTCCGCCGGGCTCAATGGGCTGGCCTTACATGGGTGAAACCCTCCAACTCTACTCTCAAGATCCCAATGTCTTCTTTGCCTCCAAAAAGAAGAGATATGGCCCAATTTTCAAGTCCCATATATTGGGTTATCCTTGTGTGATGCTTTCAAGCCCTGAAGCTGTGAAGTTTGTGTTGGTGACTAAAGCTCATCTCTTTAAGCCTACATTTCCTGCTAGTAAAGAGAGGATGTTGGGTAAAAATGCCATCTTCTTTCACCAAGGTGATTACCATGCCAAATTGAGACGACTTGTCCTTCGAACTTTCATGCCCGAGGCCATCAGAAACATCGTCCCGAGCATCGAGTCCATTGCTAAGAACACCGTACAGTCTTGGGATGGACAATTGATCAACACCTTCCAAGAAATGAAGATGTTCGCATTCGAAGTTTCGTTGCTTTCGATATTCGGAAAAGACGAAGCGCTTTACTTCGAAGACCTCAAGCGATGCTACTACATTCTCGAAAAAGGCTACAATTCGATGCCGATTAACTTGCCTGGAACACTCTTCCACAAGGCCATGAAAGCCAGGAAGGAACTAGCACAAATCTTAAACAAGATCCTCACAACCAGGAGGGAGATGAAACACGATTACAACGACCTCCTAGGATCTTTCATGGGCGAAAAGGAAGGCCTCACCGATGAACAAATCGCCGATAATGTTATCGGTCTCATCTTTGCTGCTCGCGATACGACAGCCAGTGTTCTAACATGGATCTTGAAGTACCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGCTGAACAAGAAGCAATAATGAAAGAAAAACAGAGTGGAGATGATAATCTCACCTGGGCTGACACCAAAAACATGCCAATCACTTCAAGGGTGATTCAAGAAACTCTAAGAGTGGCCTCAGTTTTATCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATTTGATGGATATTTGATCCCAAAAGGATGGAAAGTTTTGCCTCTCTTCAGAAACATTCATCACAGCCCAGAAATTTTTCCTCAGCCTGACAAGTTTGATCCTTCGAGATTTGAGGTTGCTCAAAAACCCAATACTTACATGCCATTTGGCAATGGGACCCACTCCTGCCCAGGAAATGAATTGGCCAAGCTGGAGATGCTGGTTCTACTCCATCATTTAACCACAAAGTACAGGTGGGTAAATTTTCCAACTTTTTTTACCTTCAACATATAA | 1332 | 43.92 | MLVFVALVFFFFIFLFFHSLFKFSSLARRKLPLPPGSMGWPYMGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMLSSPEAVKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPGTLFHKAMKARKELAQILNKILTTRREMKHDYNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIMKEKQSGDDNLTWADTKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPEIFPQPDKFDPSRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWVNFPTFFTFNI | 443 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 9984575 | 9987772 | + | Tan0002444.2 | Tan01g1024 | 738448 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g1024 | 443 | CDD | CYP90-like | 63 | 436 | - | - | |
| Tan01g1024 | 443 | Gene3D | Cytochrome P450 | 24 | 438 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | P450 superfamily signature | 272 | 289 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | P450 superfamily signature | 329 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | P450 superfamily signature | 400 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | P450 superfamily signature | 409 | 420 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | E-class P450 group I signature | 409 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | E-class P450 group I signature | 328 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | E-class P450 group I signature | 281 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | E-class P450 group I signature | 261 | 278 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | E-class P450 group I signature | 399 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PRINTS | E-class P450 group I signature | 368 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | FunFam | Abscisic acid 8 | 24 | 437 | - | - | |
| Tan01g1024 | 443 | SUPERFAMILY | Cytochrome P450 | 27 | 436 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | Pfam | Cytochrome P450 | 34 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1024 | 443 | PANTHER | CYTOCHROME P450 26 | 32 | 430 | - | GO:0004497(PANTHER)|GO:0009687(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Tan01g1024 | 443 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 402 | 411 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1024 | Tan-Chr1:9984575 | Tan01g2414 | Tan-Chr1:29923666 | 1.30E-153 | dispersed | |
| Tan01g1023 | Tan-Chr1:9984575 | Tan01g1024 | Tan-Chr1:9984575 | 5.70E-250 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g1024 | K09843 | - | csv:101212508 | 810.061 |