Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1044 | ATGGGCATCTGTCTGGTCAAATTTTCTGGCTTGTTGGTTCTTCATGTTCTACTTCTTTCTATGTCGATGAATAAAAGCACTGGCCTCACCTCTGATGGTGAGGCACTTCTAAGTTTTAGGATGGCAGTTTCCAGTTCTGATGGGGTCATCTTTCAGTGGAGGCCAGAGGATCCAAACCCTTGTAATTGGACTGGAGTGGTCTGCGATTCAAAATCAAAGAGAGTAATCTCATTGAAGCTTGGAAGTCACAAACTGAGTGGGTTCATTGCACCTGAACTTGGGAAGCTAGACCAATTAAAGACCCTAACTCTTTCGGACAACAACCTATATGGAACAATACCATCAGAACTGGGAAATTGTTCGCAGTTGCAGGAAATGTTCTTACAAAGAAACTACCTAAGCGGAGTGATTCCCTATGAGCTGGGAAACCTTTCTGAGTTGGAAATGTTAGACGTTTCTAGCAACTCACTTAGTGGAAATATCCCAACGTCCCTTGGGAATTTAGATAAGCTCGCTCTTCTCAACGTGTCATCAAATTTTTTAATTGGACCAGTACCTTCTGATGGCGTTCTTTCCAAATTTTCAGAGACTTCCTTTGTTGGAAATCGTGGTTTATGTGGGAAACAAGTCAGTGTCACTTGCAAAGACGATACCACAGGATCTGGAACAAATGCCGAGCCCCCAGGCTCAGGCCAAAATCAAATGAGGAAGAAGTACTCTGGTCGACTGCTCATAAGTGCATCAGCTACCGTGGGGGCACTACTACTTGTTGCTCTTATGTGTTTCTGGGGTTGCTTTCTTTATAAAAGATTTGGAAAAAATGAAAAGAAAGGTCTTGCAAAGAATGTCGGTGGAGGTGCATCAGTTGTGATGTTTCATGGAGACTTGCCGTATTCTTCAAAAGACATCATGAAGAAGTTGGAAACCTTGAATGAGGAACACATAATCGGTTCTGGGGGTTTTGGAACTGTTTACAGGCTTGCAATGGATGATGGCAATGTATTTGCTTTGAAAAATATTGTAAAGATAAATGAGGGGTTTGATCACTTTTTTGAGAGGGAACTTGAAATTCTTGGAAGTTTAAAGCATCGGTACCTTGTTAATTTGAGAGGATATTGCAACTCTCCTGCATCGAAACTGTTGATTTATGATTACCTATCTGGGGGCAGCCTTGATGAGGCCCTTCATGAAAGATCTGAGCAATTAGATTGGGACACACGCTTGAATATTATATTGGGAGCAGCAAAAGGGCTTGCCTATCTGCACCATGATTGTTCACCCAGAATCATACATCGGGATATCAAGTCAAGCAACATTTTACTTGATGGTAATCTGGATGCCCGAGTTTCTGACTTTGGACTTGCCAAGCTTCTGGACGACGATAAATCTCACATTACAACCATTGTTGCCGGAACATTTGGTTATTTGGCCCCCGAATATATGCAAAGTGGTAGAGCAACTGAAAAGACCGATGTATATAGTTTTGGAGTCCTGGTACTTGAAGTACTGAGTGGAAAACGACCTACGGATGCATCATTTATTGAGAAAGGCCTGAACATTGTTGGCTGGCTAAATTTTCTTGTCACGGAGAACAGGCAACGAGAAATAGTTGATTCACAATGTGAAGGAGTGCAGACAGAAACTCTTGATTCATTGCTCAGGCTTGCTATTCAGTGTGTTTCTTCCTGTCCAGACGATCGACCAACCATGCACCGAGTAGTTCAGTTCTTTGAATCTGAGGTTATGACGCCATGCCCAAGTGACTTCGATGATTCCAATTCTGATTAA | 1788 | 42.34 | MGICLVKFSGLLVLHVLLLSMSMNKSTGLTSDGEALLSFRMAVSSSDGVIFQWRPEDPNPCNWTGVVCDSKSKRVISLKLGSHKLSGFIAPELGKLDQLKTLTLSDNNLYGTIPSELGNCSQLQEMFLQRNYLSGVIPYELGNLSELEMLDVSSNSLSGNIPTSLGNLDKLALLNVSSNFLIGPVPSDGVLSKFSETSFVGNRGLCGKQVSVTCKDDTTGSGTNAEPPGSGQNQMRKKYSGRLLISASATVGALLLVALMCFWGCFLYKRFGKNEKKGLAKNVGGGASVVMFHGDLPYSSKDIMKKLETLNEEHIIGSGGFGTVYRLAMDDGNVFALKNIVKINEGFDHFFERELEILGSLKHRYLVNLRGYCNSPASKLLIYDYLSGGSLDEALHERSEQLDWDTRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLDDDKSHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDSQCEGVQTETLDSLLRLAIQCVSSCPDDRPTMHRVVQFFESEVMTPCPSDFDDSNSD | 595 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 10243473 | 10255643 | + | Tan0011771.1 | Tan01g1044 | 738468 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1044 | 595 | Pfam | Leucine rich repeat | 98 | 157 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1044 | 595 | SUPERFAMILY | L domain-like | 29 | 193 | - | - | |
Tan01g1044 | 595 | ProSitePatterns | Protein kinases ATP-binding region signature. | 316 | 338 | IPR017441 | GO:0005524(InterPro) | |
Tan01g1044 | 595 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 429 | 441 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g1044 | 595 | Pfam | Leucine rich repeat N-terminal domain | 30 | 69 | IPR013210 | - | |
Tan01g1044 | 595 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 386 | 588 | - | - | |
Tan01g1044 | 595 | FunFam | LRR receptor-like serine/threonine-protein kinase FEI 1 | 284 | 385 | - | - | |
Tan01g1044 | 595 | SUPERFAMILY | Protein kinase-like (PK-like) | 292 | 577 | IPR011009 | - | |
Tan01g1044 | 595 | Gene3D | Ribonuclease Inhibitor | 29 | 216 | IPR032675 | - | |
Tan01g1044 | 595 | SMART | serkin_6 | 310 | 577 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1044 | 595 | Gene3D | Phosphorylase Kinase; domain 1 | 281 | 385 | - | - | |
Tan01g1044 | 595 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 29 | 191 | - | - | |
Tan01g1044 | 595 | Pfam | Protein kinase domain | 312 | 575 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1044 | 595 | ProSiteProfiles | Protein kinase domain profile. | 310 | 582 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1044 | 595 | Gene3D | Transferase(Phosphotransferase) domain 1 | 386 | 584 | - | - | |
Tan01g1044 | 595 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 164 | 579 | IPR050647 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1044 | Tan-Chr1:10243473 | Tan01g4113 | Tan-Chr1:105970613 | 4.20E-221 | dispersed | |
Tan01g1044 | Tan-Chr1:10243473 | Tan05g2077 | Tan-Chr5:71201561 | 1.30E-132 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67009 | PF00069 | Pkinase | 2.80E-47 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1044 | - | - | - | 0.0 |