Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1044 ATGGGCATCTGTCTGGTCAAATTTTCTGGCTTGTTGGTTCTTCATGTTCTACTTCTTTCTATGTCGATGAATAAAAGCACTGGCCTCACCTCTGATGGTGAGGCACTTCTAAGTTTTAGGATGGCAGTTTCCAGTTCTGATGGGGTCATCTTTCAGTGGAGGCCAGAGGATCCAAACCCTTGTAATTGGACTGGAGTGGTCTGCGATTCAAAATCAAAGAGAGTAATCTCATTGAAGCTTGGAAGTCACAAACTGAGTGGGTTCATTGCACCTGAACTTGGGAAGCTAGACCAATTAAAGACCCTAACTCTTTCGGACAACAACCTATATGGAACAATACCATCAGAACTGGGAAATTGTTCGCAGTTGCAGGAAATGTTCTTACAAAGAAACTACCTAAGCGGAGTGATTCCCTATGAGCTGGGAAACCTTTCTGAGTTGGAAATGTTAGACGTTTCTAGCAACTCACTTAGTGGAAATATCCCAACGTCCCTTGGGAATTTAGATAAGCTCGCTCTTCTCAACGTGTCATCAAATTTTTTAATTGGACCAGTACCTTCTGATGGCGTTCTTTCCAAATTTTCAGAGACTTCCTTTGTTGGAAATCGTGGTTTATGTGGGAAACAAGTCAGTGTCACTTGCAAAGACGATACCACAGGATCTGGAACAAATGCCGAGCCCCCAGGCTCAGGCCAAAATCAAATGAGGAAGAAGTACTCTGGTCGACTGCTCATAAGTGCATCAGCTACCGTGGGGGCACTACTACTTGTTGCTCTTATGTGTTTCTGGGGTTGCTTTCTTTATAAAAGATTTGGAAAAAATGAAAAGAAAGGTCTTGCAAAGAATGTCGGTGGAGGTGCATCAGTTGTGATGTTTCATGGAGACTTGCCGTATTCTTCAAAAGACATCATGAAGAAGTTGGAAACCTTGAATGAGGAACACATAATCGGTTCTGGGGGTTTTGGAACTGTTTACAGGCTTGCAATGGATGATGGCAATGTATTTGCTTTGAAAAATATTGTAAAGATAAATGAGGGGTTTGATCACTTTTTTGAGAGGGAACTTGAAATTCTTGGAAGTTTAAAGCATCGGTACCTTGTTAATTTGAGAGGATATTGCAACTCTCCTGCATCGAAACTGTTGATTTATGATTACCTATCTGGGGGCAGCCTTGATGAGGCCCTTCATGAAAGATCTGAGCAATTAGATTGGGACACACGCTTGAATATTATATTGGGAGCAGCAAAAGGGCTTGCCTATCTGCACCATGATTGTTCACCCAGAATCATACATCGGGATATCAAGTCAAGCAACATTTTACTTGATGGTAATCTGGATGCCCGAGTTTCTGACTTTGGACTTGCCAAGCTTCTGGACGACGATAAATCTCACATTACAACCATTGTTGCCGGAACATTTGGTTATTTGGCCCCCGAATATATGCAAAGTGGTAGAGCAACTGAAAAGACCGATGTATATAGTTTTGGAGTCCTGGTACTTGAAGTACTGAGTGGAAAACGACCTACGGATGCATCATTTATTGAGAAAGGCCTGAACATTGTTGGCTGGCTAAATTTTCTTGTCACGGAGAACAGGCAACGAGAAATAGTTGATTCACAATGTGAAGGAGTGCAGACAGAAACTCTTGATTCATTGCTCAGGCTTGCTATTCAGTGTGTTTCTTCCTGTCCAGACGATCGACCAACCATGCACCGAGTAGTTCAGTTCTTTGAATCTGAGGTTATGACGCCATGCCCAAGTGACTTCGATGATTCCAATTCTGATTAA 1788 42.34 MGICLVKFSGLLVLHVLLLSMSMNKSTGLTSDGEALLSFRMAVSSSDGVIFQWRPEDPNPCNWTGVVCDSKSKRVISLKLGSHKLSGFIAPELGKLDQLKTLTLSDNNLYGTIPSELGNCSQLQEMFLQRNYLSGVIPYELGNLSELEMLDVSSNSLSGNIPTSLGNLDKLALLNVSSNFLIGPVPSDGVLSKFSETSFVGNRGLCGKQVSVTCKDDTTGSGTNAEPPGSGQNQMRKKYSGRLLISASATVGALLLVALMCFWGCFLYKRFGKNEKKGLAKNVGGGASVVMFHGDLPYSSKDIMKKLETLNEEHIIGSGGFGTVYRLAMDDGNVFALKNIVKINEGFDHFFERELEILGSLKHRYLVNLRGYCNSPASKLLIYDYLSGGSLDEALHERSEQLDWDTRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLDDDKSHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDSQCEGVQTETLDSLLRLAIQCVSSCPDDRPTMHRVVQFFESEVMTPCPSDFDDSNSD 595
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 10243473 10255643 + Tan0011771.1 Tan01g1044 738468
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1044 595 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515(InterPro)
Tan01g1044 595 SUPERFAMILY L domain-like 29 193 - -
Tan01g1044 595 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524(InterPro)
Tan01g1044 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1044 595 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Tan01g1044 595 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 386 588 - -
Tan01g1044 595 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 284 385 - -
Tan01g1044 595 SUPERFAMILY Protein kinase-like (PK-like) 292 577 IPR011009 -
Tan01g1044 595 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Tan01g1044 595 SMART serkin_6 310 577 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1044 595 Gene3D Phosphorylase Kinase; domain 1 281 385 - -
Tan01g1044 595 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Tan01g1044 595 Pfam Protein kinase domain 312 575 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1044 595 ProSiteProfiles Protein kinase domain profile. 310 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1044 595 Gene3D Transferase(Phosphotransferase) domain 1 386 584 - -
Tan01g1044 595 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 164 579 IPR050647 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1044 Tan-Chr1:10243473 Tan01g4113 Tan-Chr1:105970613 4.20E-221 dispersed
Tan01g1044 Tan-Chr1:10243473 Tan05g2077 Tan-Chr5:71201561 1.30E-132 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67009 PF00069 Pkinase 2.80E-47 CL0016 Tan PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1044 - - - 0.0