Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1129 ATGGCGGCGAATGCGACGGTGGCCGGAAGCTGTCCGGCGGCGATGAAAGCGACGTCGAACGGGGTGTTTCAAGGCGACAATCCGCTTGATTTTGCTCTTCCTTTAGCGATTCTTCAGATATGTTTGGTGGTCGTTCTCACTCGTGTTCTTGCTTTGCTTCTCCGACCACTCAGACAGCCTCGAGTCATTGCTGAGATTGTCGGGGGAATATTGCTGGGGCCATCAGCGGTGGGTCGGAGCCAAGAATTTCTTCACAGAGTGTTCCCAGCGAGAAGCCTAACAGTGTTGGACACATTGGCCAATCTTGGTCTTCTCTTCTTCTTGTTTCTGGTTGGCCTCGAGCTTGATCTTAAATCCCTCCGCCAGACCGGAAAGGTCGCAATGGCCATCGCCGTCGCCGGAATCACCCTTCCCTTCGTCCTCGGCATCGGCACCTCCTACATCCTCCGTTCCACCATCTCCCAAGGCGTCCACGGCCCTCCCTTCCTCGTCTTCATGGGCGTCGCTCTTTCCATCACCGCCTTCCCTGTTCTTGCCCGCATCCTTGCCGAGCTCAAGCTCTTAACCACCAACGTCGGTCGCATGGCCATGTCCGCCGCTGCCGTCAATGACGTTGCTGCCTGGATCCTCCTCGCCCTCGCCATCGCCCTCTCCGGCACCGGCCGCTCCCCTCTCGTCTCCCTCTGGGTTTTCATCTGCGGCTCTGCTTTTGTCCTGTTCTGCTTCTTCACTCTGCCTCCCATCTTCCGCTGGATGTCCCGCCGCTGCTCCAACGGCGAGCCCGTCAGCGAACTCTACATTTGCGCCACCTTATCCATCGTCCTCGCAGCCGGATTCTTCACCGATTTAATCGGAATTCACGCCCTCTTCGGCGCCTTCGTCGTCGGCGTTCTCATCCCAAAAGACGGCCCACTCGCCGGCGCCCTCGTCGAGAAAGTGGAAGACCTCGTCTCGGGTCTCTTCCTCCCTCTGTATTTCGTTTCAAGCGGATTGAAAACCAACATCGCCACCATCAAAGGCGCCCAATCGTGGGGACTCCTCGTCCTCGTGGTTTTCACCGCTTGTTTCGGGAAAATCATCGGCACCATCGCCGTCGCACTCTTCTGCAAAATGCCACTCCAAGAATCCGTCGCCTTGGGATTCTTAATGAACACGAAAGGCCTCGTGGAATTGATCGTCCTGAACATCGGAAAAGACAGAAAAGTTCTGAACGATCAGACTTTTGCAATTCTAGTCCTAATGGCGATCATCACGACGTTCATCACCACCCCAATCGTGATGGCGGTTTACAAGCCGGCGAAGAGGAAGAGCAATTCCGAATACGTGTACAGAACAATCGAGCGAGAGGATCCGAATTCAGAGCTGCGGATTTTGTCCTGTTTTCACTCGGTGAACAACATTCCTTCGATTTTGAATTTGATTGAGGCGTCTCGTGGGACGGAAGGGCGTGGGCGGCGGCTGTGCGTTTATGCGATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCCATTGTTATGGTCCATCGAGCTCGAAAGAATGGGCTGCCGTTTTGGAATAAAGGAGGGAAGTCTGATTCGGATCAAATTGTGGTGGCTTTTGAGGCTTTTCGTCAACTAAGTCGAGTATCTATACGGCCGATGACGGCGATATCTCCGCTCTCTGACATGCATGAAGATGTCTGCAACAGTGCCGAGCGGAAACGAGCAGCCATTATCATCCTCCCATTCCACAAACACCAAAGGTTTGATGGATGTTTGGAGACAACACGGGGCGATTTCCAATGGGTAAATCAAAAAGTTATGGAACAGCCACCTTGCTCCGTTGGGATTTTGGTCGACCGAGGATTCGGAGGTGGTTCTCACATTTGCGCTAGCAACGTCTCTTCCACAGTAACCGTCTTCTTCTTCGGCGGTCGCGACGACCGTGAAGCTCTAGCCTACGGTCGGAGAATGGCAGAGCATCCTGGAATAACCATAAACGTTATCCGCTTCCTTCCCAGTCCCGACATGGCTGTCGAATCCATTGCGGTCGACATTAATGTTTCAGCAGCCATGGATGATGAGAGGGTGTTGTCGGACTTCAACATGAACAAAACAGAGGACGAGTCCGTTAAGTATGAACAGAGGGCAGTGAGCAAAAGCAGCGACGCCATTGAAATAATGAGGGAGTTTAGTAGATGCAATTTGATATTAGTGGGTCAAATGCCAGAAGGGAAAGTAGTGGACAGTTTTCATTTAAAAAGTCTAGAATGTCCGGAGTTGGGTCCAATTGGCAGCTTGTTGACATCATCACTAGAGCTCTCCACCTCAGCTTCCGTGTTGGTGATTCAGCAGTTTCGTGGTCCCTCCTTGTCTTCTTCTTCCACGTCTGCTATGGTATTGCCGGAAGAACTTAATTAA 2400 52.79 MAANATVAGSCPAAMKATSNGVFQGDNPLDFALPLAILQICLVVVLTRVLALLLRPLRQPRVIAEIVGGILLGPSAVGRSQEFLHRVFPARSLTVLDTLANLGLLFFLFLVGLELDLKSLRQTGKVAMAIAVAGITLPFVLGIGTSYILRSTISQGVHGPPFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWILLALAIALSGTGRSPLVSLWVFICGSAFVLFCFFTLPPIFRWMSRRCSNGEPVSELYICATLSIVLAAGFFTDLIGIHALFGAFVVGVLIPKDGPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIKGAQSWGLLVLVVFTACFGKIIGTIAVALFCKMPLQESVALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPIVMAVYKPAKRKSNSEYVYRTIEREDPNSELRILSCFHSVNNIPSILNLIEASRGTEGRGRRLCVYAMHLMELTERSSAIVMVHRARKNGLPFWNKGGKSDSDQIVVAFEAFRQLSRVSIRPMTAISPLSDMHEDVCNSAERKRAAIIILPFHKHQRFDGCLETTRGDFQWVNQKVMEQPPCSVGILVDRGFGGGSHICASNVSSTVTVFFFGGRDDREALAYGRRMAEHPGITINVIRFLPSPDMAVESIAVDINVSAAMDDERVLSDFNMNKTEDESVKYEQRAVSKSSDAIEIMREFSRCNLILVGQMPEGKVVDSFHLKSLECPELGPIGSLLTSSLELSTSASVLVIQQFRGPSLSSSSTSAMVLPEELN 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11085310 11091331 + Tan0012513.2 Tan01g1129 738553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1129 799 FunFam Cation/H(+) antiporter 15 35 437 - -
Tan01g1129 799 Gene3D - 35 440 IPR038770 -
Tan01g1129 799 PANTHER CATION/H + ANTIPORTER 11 780 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Tan01g1129 799 Pfam Sodium/hydrogen exchanger family 47 426 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1129 Tan-Chr1:11085310 Tan01g1131 Tan-Chr1:11122339 3.80E-302 dispersed
Tan01g1128 Tan-Chr1:11084435 Tan01g1129 Tan-Chr1:11085310 0.00E+00 tandem
Tan01g1129 Tan-Chr1:11085310 Tan01g1130 Tan-Chr1:11099510 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1129 K26731 - csv:101203169 1282.7