Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1130 ATGGCGATGAATGCGACAGCGGTGAGTGCATGTCCGGCGCCGATGAAGGCCACTTCAAACGGTGTTTTTCAAGGCGATAATCCTCTGGATTTTGCTCTGCCTCTCGCTATCCTTCAGATTTGTCTCGTTGTTCTTCTCACTCGACTTCTCTCTTTTCTTCTTCGTCCCATTCGACAGCCTCGTGTTATTGCTGAGATCGTCGGCGGAATCTTGCTGGGTCCATCGGCGCTTGGCCGGAACTTGAATTACTTGCACGCAATCTTCCCGCCGAAGAGTCTCACCGTTTTGGACACGTTGGCCAATTTGGGTCTACTCTTCTTCCTCTTTCTCGTCGGCTTGGAGTTGGACCCTAAATCCCTCCGCCGCACCGGAAAACGAGCGATGAGCATTGCCTTTGCCGGAATCACTCTCCCGTTCATCCTCGGCATTGGCACCTCCGTTGTTCTCCGATCAACCATTGCCAAAGGCGTCAATGAAGCCGCCTTCCTCGTTTTCATGGGCGTTGCTCTTTCAATCACTGCCTTTCCCGTTTTGGCTCGAATTTTGGCCGAGCTTAAGCTTTTGACCACCGACGTCGGCCGGATGGCCATGTCCGCTGCTGCCGTCAACGACGTGGCGGCGTGGATCCTTCTGGCGTTGGCAATTGCACTCTCCGGCACCGGCCACTCTCCTCTGGTTTCCCTCTGGGTTTTCCTGTCTGGCTCGGTTTTTGTCCTGTTCTGTACCTTCTCTCTTCCGCCGTTGTTCCGGTGGATGTCGCAACGGTGCTCCGAGGGAGAGCCGGTGAAGGAATTGTACATTTGTGCCACTTTGTCGCTCGTTTTGGCTGCTGGGTTCGTCACGGATTTGATCGGAATCCATGCGCTGTTCGGAGCTTTCGTCGTCGGAGTTTTGGTTCCTAAAGAGGGCCCATTCGCTGGAGCTCTGGTTGAGAAAGTGGAAGATCTGGTCTCCGGTCTTTTTCTTCCATTATACTTCGTTTCGAGCGGATTGAAAACAAATGTCGCAACAATTCGAGGAGCTCAATCATGGGCTCTTCTCGTTTTAGTAATTTTCACCGCCTGTTTTGGCAAAATCGTTGGAACTGTTTCTGTTTCCCTGCTCTGCAAAATGCCATTAGAAGAATCACTCGCTCTGGGGTTTTTGATGAACACGAAAGGCCTGGTCGAATTAATCGTTCTGAACATTGGCAAAGACCGGAAGGTTTTGAATGATCAAACATTTGCTATTATGGTTCTAATGGCGATCTTCACAACGTTCATCACAACTCCAATCGTCATAGCGGTTTACAAGCCGGCGAAAAAACAGAGCAAATCCAATTACAAGCACAGAACACTAGAGAGGGAAAATCCCGATTCCCAGCTGCGGATTTTGGCTTGTTTCCACTCTTTCGACAACATTCCGGCGACGATTAATCTCATCGAGGCATCTCGGGGAATAGATAAGAAAGAAGGGCTCTGTGTTTATGCTCTGCATCTAACGGAGCTAACAGAGAGATCCTCCGCCATTCTCATGGTCCACAAAGCAAGAAAAAATGGCCTCCCCTTTTGGAACAAAGGCCGGTCCGACTCGAACCAGATCGTTGTCGCCTTCGAAGCATTCCGGCAACTCAGCCGGGTCTCAATCCGGCCGATGACCGCCATTTCTGCTTTGTCCAATATGCACGAAGATATCTGCAGCAGCGCCGAGAGAAAAAGGGCCGCCATTATAATCCTCCCATTTCACAAGCACCAAAGATTGGACGGATCTCTGGAAACGACGAGGACCGATTACCGGTTGGTCAACCGTAAAGTTCTGGAACAATCGCCCTGCTCCGTCGGAATTCTGATCGACAGAGGACTCGGCGGCGGTTCCCATGTCTGCGCCAGTAACGTCTCCTCCACCATCACTGTCTTCTTCTACGGCGGTCGCGACGACCGTGAAGCTCTGGCGTTCGGGAAAAGAATGGCGGAGCATCCCGGAATCAGCCTGCAGGTCATCCGATTCTGCCCCAGCACCGATTTCGCTGCGGAATCCATCGCCGTCGACATAAAGAAGAAAGATTTGGCCGATTCAGGCGCAGACGATCTGGCGTTGTCATCGATTGTATACGAAGAGAGGAAGGTGAGCAAAGGGGGCTACGCCATTGAAGCGATGAAGGAGTTCAGTAAATGCAATTTGATTTTGGTCGGAAGGATGCCGGAGGGAGAAGTGGTGAGGAGTATGAATATGAACGGTGCCGAGGGTTCGGAGCTTGGGCCAGTCGGCGGGCTGTTGGCATCGCCGGAGTTTTCGACGACGGCGTCGGTGCTTGTGGTGCAGCAGTTTCATGGGCAGGTACCATTGCTGGTGGATTCGACTTCCAAAAGCGAGTCAACTGACTGA 2364 51.95 MAMNATAVSACPAPMKATSNGVFQGDNPLDFALPLAILQICLVVLLTRLLSFLLRPIRQPRVIAEIVGGILLGPSALGRNLNYLHAIFPPKSLTVLDTLANLGLLFFLFLVGLELDPKSLRRTGKRAMSIAFAGITLPFILGIGTSVVLRSTIAKGVNEAAFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGHSPLVSLWVFLSGSVFVLFCTFSLPPLFRWMSQRCSEGEPVKELYICATLSLVLAAGFVTDLIGIHALFGAFVVGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIRGAQSWALLVLVIFTACFGKIVGTVSVSLLCKMPLEESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPIVIAVYKPAKKQSKSNYKHRTLERENPDSQLRILACFHSFDNIPATINLIEASRGIDKKEGLCVYALHLTELTERSSAILMVHKARKNGLPFWNKGRSDSNQIVVAFEAFRQLSRVSIRPMTAISALSNMHEDICSSAERKRAAIIILPFHKHQRLDGSLETTRTDYRLVNRKVLEQSPCSVGILIDRGLGGGSHVCASNVSSTITVFFYGGRDDREALAFGKRMAEHPGISLQVIRFCPSTDFAAESIAVDIKKKDLADSGADDLALSSIVYEERKVSKGGYAIEAMKEFSKCNLILVGRMPEGEVVRSMNMNGAEGSELGPVGGLLASPEFSTTASVLVVQQFHGQVPLLVDSTSKSESTD 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11099510 11102862 + Tan0012461.1 Tan01g1130 738554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1130 787 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan01g1130 787 Gene3D - 35 440 IPR038770 -
Tan01g1130 787 PANTHER CATION/H + ANTIPORTER 11 770 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Tan01g1130 787 FunFam Cation/H(+) antiporter 15 35 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1128 Tan-Chr1:11084435 Tan01g1130 Tan-Chr1:11099510 0.00E+00 dispersed
Tan01g1130 Tan-Chr1:11099510 Tan01g1132 Tan-Chr1:11126419 8.9e-312 dispersed
Tan01g1129 Tan-Chr1:11085310 Tan01g1130 Tan-Chr1:11099510 0.00E+00 tandem
Tan01g1130 Tan-Chr1:11099510 Tan01g1131 Tan-Chr1:11122339 8.9e-312 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1130 K26731 - csv:101202937 1266.14