Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1131 ATGGCTTCGAATACTACAGCAGTAACCAAATGTCCATCTCCAATGAAAGCAACATCAAATGGCATTTTCCAGGGCGATAATCCTCTTGATTTTGCTCTCCCTCTTGTCATTCTGCAAATATGTTTGGTCGTCGTACTTACTCGTGGCCTTGCTTTTCTTCTGAGGCCCTTAAAACAGCCACGAGTGATTGGAGAAATTATTGGAGGAATACTTCTTGGTCCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATACAATATTTCCGTCCAATAGTATCACATTGTTAGATACCATAGCAAACATTGGATTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCCTTGGCATTGCTGTTACTGGAATCGGCCTTCCCTTTGCTCTAGGAATTGGATCATCATTTGTCCTCCGAGGAACCATATCCAAAGGTGTAAACGCTTCTGCGTTTCTCATATTCATGGGAGTTGCACTTTCAATAACAGCATTTCCCGTCCTAGCTCGTATTCTTGCCGAGCTTAAACTTCTAACCACTGATGTTGGCAGGATGGCTATGTCTGCTGCAGCAGTGAATGACGTAGCTGCCTGGATTCTTCTTGCTCTTGCCATTGCATTATCTGGTTCCGATAAATCTCCCCTAACTGCAGTTTGGGTTCTTTTATCTGGCTGCGCCTTTGTTGTTGCCGCTATTGTCATTTTATCCCCTGTTTTCAAATGGATGACCAAGCAATGTTTTCAAGGGGAGCCGGTACGTGAGATCTACATATGCGCTACATTAGCTATCGTCCTAGCTGCTGGATTTGTCACAGATTTTATTGGGATACATGCGATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCCGAAGGATGGACCACTAGTAGGAGCTTTGGTAGAGAAAATTGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTTTACTTTGTGTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAGGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATAGTTACCGCCTGTTTCGGAAAAATATTTGGCACTTTTCTCGTTTCCATTCTTTGTAAAATACCTGTTCGTGAGGCTCTCGCATTAGGATTTCTAATGAACACAAAAGGTTTAGTGGAGCTTATTGTTCTCAACATTGGGAAAGACAGAAAGGTTTTGAATGATCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAACCGGCAAGGAGTGCCAAATTAGTCAATTATAAGCATAGGAAAATCGAACGGAAGAACAAGAATACACAGCTTAGGATTCTGACCTGTTTCCATAGTGCAGGAAACATTCCATCGATTATTAATCTGCTCGAGGCCTCGAGAGGAATTGAGAAGGACGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCTGAGAGGTCCTCGGCCATTTTAATGGTACACAAGGCCAGGAAAAATGGGTTGCCTTTCTGGAACAAGGGCCAGAGGTCGGATTCCAACCATGTTATCGTCGCATTTGAGGCCTACCAACAACTGAGCAGAGTATTCATCCGACCGATGACGGCCATCTCCTCCATGTCGGACATACATGAAGACATCTGCGATACCGCTGAGAGGAAAAGAACTGCAATCATAATTCTTCCTTTCCACAAGCACCAGAGGGTGGATGGTTCACTGGAGACTACTCGAAGCAGCATCCGCCTTGTTAATCAGAATGTTCTTGAGCACGCTCCATGTTCAGTTGGAATTTTCATTGATCGTGGGTTGGGTGGAACAAGCCATGTTTCATCGAGCAATGTTTCGCTTTTCATTACTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCTCTTTCGTATGGAGTTCGCATGGCCGAGCACCCTGGAATTAGATTGATGGTAATTCGTTTCTTCGTTGAACCCAAGCCTAGTGGGGAGATAGTCAGTGCTGATACTGTTGGGGATTCTTCTGCAAAGCCAGATTCTGAGGATGATGAGTTTCTTTCTGAATTCAAGCACAATGTGGACAAGAACGACTCCATCATGTATGTAGAGAAAACCATAGAAAGTGCTGCAGAAGCAATGGATACAGTGCAGGAGCTGAGAAGCTGCAATCTGTATCTCGTTGGCCGAACACCAGATATCAAAGCAACATTTTCCTTAAACAGAAGCGACTGTCCAGAGCTTGGTCCAGTCGGGAACCTGTTGACCTCACCGAACTTCCCAATTACAGCGTCGGTTTTGGTGGTGCAGCAATATCGTTCCGAGTTACCAATGAATTTGGCTTTAGATTCTGCTGAGGGAGAATCAGAATCAGCATAG 2400 43.75 MASNTTAVTKCPSPMKATSNGIFQGDNPLDFALPLVILQICLVVVLTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKNFLHTIFPSNSITLLDTIANIGLLFFLFLVGLELDLKSIRRTGKKALGIAVTGIGLPFALGIGSSFVLRGTISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCAFVVAAIVILSPVFKWMTKQCFQGEPVREIYICATLAIVLAAGFVTDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACFGKIFGTFLVSILCKIPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKLVNYKHRKIERKNKNTQLRILTCFHSAGNIPSIINLLEASRGIEKDEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSRVFIRPMTAISSMSDIHEDICDTAERKRTAIIILPFHKHQRVDGSLETTRSSIRLVNQNVLEHAPCSVGIFIDRGLGGTSHVSSSNVSLFITVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPKPSGEIVSADTVGDSSAKPDSEDDEFLSEFKHNVDKNDSIMYVEKTIESAAEAMDTVQELRSCNLYLVGRTPDIKATFSLNRSDCPELGPVGNLLTSPNFPITASVLVVQQYRSELPMNLALDSAEGESESA 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11122339 11130943 + Tan0017028.2 Tan01g1131 738555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1131 799 Gene3D - 35 437 IPR038770 -
Tan01g1131 799 Pfam Sodium/hydrogen exchanger family 47 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan01g1131 799 PANTHER CATION/H + ANTIPORTER 11 783 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Tan01g1131 799 FunFam Cation/H(+) antiporter 15 35 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1129 Tan-Chr1:11085310 Tan01g1131 Tan-Chr1:11122339 3.80E-302 dispersed
Tan01g1131 Tan-Chr1:11122339 Tan07g0862 Tan-Chr7:14615747 2.40E-211 dispersed
Tan01g1130 Tan-Chr1:11099510 Tan01g1131 Tan-Chr1:11122339 8.9e-312 tandem
Tan01g1131 Tan-Chr1:11122339 Tan01g1132 Tan-Chr1:11126419 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1131 K26731 - csv:101223205 1388.63