Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1172 | ATGGCGCTCAAAGTGTATGTAGATCGAATGTCACAGCCATCTCGCGCTGTGCTGATCTTCTGCAAGGTTAACGGGATTGCTTTTGAGGAGGTGACTGTAACTTTGTCCAAACTCCAGCAGTTGACTCCCGAATTCAAAGAGATCAACCCAATGGCAAAAGTTCCTGCCATTGTTGATGGAAGATTTAAGCTGTTCGAGAGTCATGCTATTCTTATCTATCTTTCTTGTGCGTTTCCTGGTGTGGCAGATCACTGGTATCCAGCTGATCTTTTCAGGAGGGCTAAAATTCATTCAGTTCTGGATTGGCATCATTCTAATTTACGTCGTGGTGCAGCTCTTCTTGTATTTAATACTGTTCTAGCACCTTTATTTGGCCGTCCTTCGGATCCTCAAGCAGCTGCTGAAGCTGAGATGCTTTTATCCAAGTCACTTTCGAAAATCGAGTCGTTTTGGCTGAAGGGGAATGGAAAGTTCTTGCTGGGTGGCTTTAAACCTTCCATAGCTGATCTTAGCCTGGTTTGTGAAATTACGCAACTACAGCTTTTGGATGAGAAGGATCGGAGTCGTATTCTGGGTCCGCACCTGAAAGTGGGGGAGTGGATTGAGAATACTAGAAATGCTACAAACCCGCATTTTGATGAGGTTCATAAGCTTCTCTACAAGCTCAAGGCAACTCTTACAAAGAAGAGCTTAGAGAAATTGAGTTCAAAGATGTGA | 717 | 43.93 | MALKVYVDRMSQPSRAVLIFCKVNGIAFEEVTVTLSKLQQLTPEFKEINPMAKVPAIVDGRFKLFESHAILIYLSCAFPGVADHWYPADLFRRAKIHSVLDWHHSNLRRGAALLVFNTVLAPLFGRPSDPQAAAEAEMLLSKSLSKIESFWLKGNGKFLLGGFKPSIADLSLVCEITQLQLLDEKDRSRILGPHLKVGEWIENTRNATNPHFDEVHKLLYKLKATLTKKSLEKLSSKM | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11485243 | 11488749 | - | Tan0000969.1 | Tan01g1172 | 738596 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1172 | 238 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Tan01g1172 | 238 | Gene3D | Glutaredoxin | 1 | 82 | - | - | |
Tan01g1172 | 238 | PANTHER | GLUTATHIONE S-TRANSFERASE T1-RELATED | 1 | 233 | IPR043377 | - | |
Tan01g1172 | 238 | Gene3D | - | 83 | 238 | - | - | |
Tan01g1172 | 238 | SFLD | Main (cytGST) | 1 | 231 | - | - | |
Tan01g1172 | 238 | SUPERFAMILY | Thioredoxin-like | 2 | 87 | IPR036249 | - | |
Tan01g1172 | 238 | Pfam | Glutathione S-transferase, N-terminal domain | 1 | 74 | IPR004045 | - | |
Tan01g1172 | 238 | FunFam | Glutathione S-transferase theta-1 | 83 | 231 | - | - | |
Tan01g1172 | 238 | CDD | GST_N_Theta | 3 | 78 | IPR040075 | - | |
Tan01g1172 | 238 | CDD | GST_C_Theta | 92 | 222 | IPR040077 | - | |
Tan01g1172 | 238 | SFLD | Main.4: Theta-like | 1 | 231 | - | - | |
Tan01g1172 | 238 | SUPERFAMILY | GST C-terminal domain-like | 83 | 216 | IPR036282 | - | |
Tan01g1172 | 238 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 226 | IPR010987 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1172 | Tan-Chr1:11485243 | Tan01g1174 | Tan-Chr1:11485243 | 1.70E-101 | dispersed | |
Tan01g1172 | Tan-Chr1:11485243 | Tan01g1173 | Tan-Chr1:11485243 | 2.60E-97 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1172 | K00799 | - | csv:101211608 | 382.489 |