Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1172 ATGGCGCTCAAAGTGTATGTAGATCGAATGTCACAGCCATCTCGCGCTGTGCTGATCTTCTGCAAGGTTAACGGGATTGCTTTTGAGGAGGTGACTGTAACTTTGTCCAAACTCCAGCAGTTGACTCCCGAATTCAAAGAGATCAACCCAATGGCAAAAGTTCCTGCCATTGTTGATGGAAGATTTAAGCTGTTCGAGAGTCATGCTATTCTTATCTATCTTTCTTGTGCGTTTCCTGGTGTGGCAGATCACTGGTATCCAGCTGATCTTTTCAGGAGGGCTAAAATTCATTCAGTTCTGGATTGGCATCATTCTAATTTACGTCGTGGTGCAGCTCTTCTTGTATTTAATACTGTTCTAGCACCTTTATTTGGCCGTCCTTCGGATCCTCAAGCAGCTGCTGAAGCTGAGATGCTTTTATCCAAGTCACTTTCGAAAATCGAGTCGTTTTGGCTGAAGGGGAATGGAAAGTTCTTGCTGGGTGGCTTTAAACCTTCCATAGCTGATCTTAGCCTGGTTTGTGAAATTACGCAACTACAGCTTTTGGATGAGAAGGATCGGAGTCGTATTCTGGGTCCGCACCTGAAAGTGGGGGAGTGGATTGAGAATACTAGAAATGCTACAAACCCGCATTTTGATGAGGTTCATAAGCTTCTCTACAAGCTCAAGGCAACTCTTACAAAGAAGAGCTTAGAGAAATTGAGTTCAAAGATGTGA 717 43.93 MALKVYVDRMSQPSRAVLIFCKVNGIAFEEVTVTLSKLQQLTPEFKEINPMAKVPAIVDGRFKLFESHAILIYLSCAFPGVADHWYPADLFRRAKIHSVLDWHHSNLRRGAALLVFNTVLAPLFGRPSDPQAAAEAEMLLSKSLSKIESFWLKGNGKFLLGGFKPSIADLSLVCEITQLQLLDEKDRSRILGPHLKVGEWIENTRNATNPHFDEVHKLLYKLKATLTKKSLEKLSSKM 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11485243 11488749 - Tan0000969.1 Tan01g1172 738596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1172 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Tan01g1172 238 Gene3D Glutaredoxin 1 82 - -
Tan01g1172 238 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 233 IPR043377 -
Tan01g1172 238 Gene3D - 83 238 - -
Tan01g1172 238 SFLD Main (cytGST) 1 231 - -
Tan01g1172 238 SUPERFAMILY Thioredoxin-like 2 87 IPR036249 -
Tan01g1172 238 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Tan01g1172 238 FunFam Glutathione S-transferase theta-1 83 231 - -
Tan01g1172 238 CDD GST_N_Theta 3 78 IPR040075 -
Tan01g1172 238 CDD GST_C_Theta 92 222 IPR040077 -
Tan01g1172 238 SFLD Main.4: Theta-like 1 231 - -
Tan01g1172 238 SUPERFAMILY GST C-terminal domain-like 83 216 IPR036282 -
Tan01g1172 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 226 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1172 Tan-Chr1:11485243 Tan01g1174 Tan-Chr1:11485243 1.70E-101 dispersed
Tan01g1172 Tan-Chr1:11485243 Tan01g1173 Tan-Chr1:11485243 2.60E-97 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1172 K00799 - csv:101211608 382.489