Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1173 ATGCTATCTTTAATATTGTGTATTGTTTCATATTCTTTTGACAGTCATGCTATTCTTATCTATCTTTCTTGTGCGTTTCCTGGTGTGGCAGATCACTGGTATCCAGCTGATCTTTTCAGGAGGGCTAAAATTCATTCAGTTCTGGATTGGCATCATTCTAATTTACGTCGTGGTGCAGCTCTTCTTGTATTTAATACTGTTCTAGCACCTTTATTTGGCCGTCCTTCGGATCCTCAAGCAGCTGCTGAAGCTGAGATGCTTTTATCCAAGTCACTTTCGAAAATCGAGTCGTTTTGGCTGAAGGGGAATGGAAAGTTCTTGCTGGGTGGCTTTAAACCTTCCATAGCTGATCTTAGCCTGGTTTGTGAAATTACGCAACTACAGCTTTTGGATGAGAAGGATCGGAGTCGTATTCTGGGTCCGCACCTGAAAGTGGGGGAGTGGATTGAGAATACTAGAAATGCTACAAACCCGCATTTTGATGAGGTTCATAAGCTTCTCTACAAGCTCAAGGCAACTCTTACAAAGAAGAGCTTAGAGAAATTGAGTTCAAAGATGTGA 561 41.71 MLSLILCIVSYSFDSHAILIYLSCAFPGVADHWYPADLFRRAKIHSVLDWHHSNLRRGAALLVFNTVLAPLFGRPSDPQAAAEAEMLLSKSLSKIESFWLKGNGKFLLGGFKPSIADLSLVCEITQLQLLDEKDRSRILGPHLKVGEWIENTRNATNPHFDEVHKLLYKLKATLTKKSLEKLSSKM 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11485243 11488749 - Tan0000969.2 Tan01g1173 738597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1173 186 FunFam Glutathione S-transferase theta-1 31 179 - -
Tan01g1173 186 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 37 174 IPR010987 -
Tan01g1173 186 CDD GST_C_Theta 40 170 IPR040077 -
Tan01g1173 186 Gene3D - 30 186 - -
Tan01g1173 186 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 13 181 IPR043377 -
Tan01g1173 186 SUPERFAMILY GST C-terminal domain-like 31 165 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1172 Tan-Chr1:11485243 Tan01g1173 Tan-Chr1:11485243 2.60E-97 tandem
Tan01g1173 Tan-Chr1:11485243 Tan01g1174 Tan-Chr1:11485243 1.90E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1173 K00799 - csv:101211608 270.396