Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1193 ATGAACACACTGCAACATTTATCAGAAATGCCTGGAGTGGTTCGAGTTCTTCGAAATTCGATATATCAAATGCATACGACAAGAAGTTGGGATTTCCTCGGGCTCTCTTCCTCTCCTAGCTCTGACTCTGATAATCTTCTCCATCGCGGTAAAATGGGCGACGATATCATTATAGGTGTCATTGATTCGGGTACATTAACTCTCCTTCTCTCTCCCAAAATAAGCTCCAAACAATTACTTTTTAAATATTTAAATATAAGAACAGGAATCTGGCCGGAATCGGAAGCATTCTCCGATAAAGGAATGGGCCCAGTCCCGTCACGATGGAGAGGGAGATGCGAAAGAGGAGAACAATTCAATTGGACAAACTGCAATAGAAAAGTGATAGGAGCACGTTGGTACATGGAGGGGTTCATTGCTGATTTTGGGAAGGAGGCGTTAGCCACATCCAAGGAGTACTCATCCCCACGAGACGCCAGCGGGCACGGAACCCACGTCGCCAGCACAGCCGCAGGTTCGTTCGTGAGAAACGTCAGCTACCGCGGGCATGGCAGTGGCACGGTCAGGGGCGGGGCGCCACTTGCACGGTTAGCCATATACAAGGCGTTGTGGTTGTTGAACAACCAGGCGTCGGGGTCATCGGCGGACATATTAATGGCCATAGATGAGGCGATTAGCGACGGTGTGGATGTGCTATCTATATCCATTGGGGGTTCTTTTCCTTTGTTTCCAGAGTTTGACGAAGTCAACGAAATTGCAATTGGGTCGTTTCATGCTATTGCGAGGGGGATTTCTGTCGTGTGCTCGGCTGGCAATGATGGCCCACGTCAGCAGAAGGTGGTGAACACTGCGCCTTGGATTTTGACTGTCGCTGCCAGCACTATGGATAGAGCCTTTCTTTCCCCCATTACTACTCTTGGAGATAATACCACTTATTTTGGTCAAAGCTTCCTCAATTCAAAAAAGGACCTTGTCGTCCAGTTGGCAACTTCGCTGACTGGAAGATGTGATGAGATTTTTGGAAATGATACTTCATTAAGTGGGAAGGTGGTAATTTGCTTCTCCGATTTAGCTGATATTAAGACTACATTGGCGGCCGGGGCGGCGGTGATACAGGCAAATGGGAGTGGGATAATTGTCGCCGGCCAAAACGTGGATATCTTATTTCCATGTAGACAATCCTTTCCATGCATCCTAGTCGATACCGATGTTGGCACTAAATTATTCTTTTACACCTTGGACAACAGGAACCCAATGATAAGGTTGGGGCGTGCAAAAACCATAATAGGCAATCCCATATCAACCAAAATAGCCCATTTCTCATCTAGAGGTCCAAATTCTGCTTCACCCGCAATTCTCAAGCCAGATATAGCGGGTCCTGGATCCAACATTGTAGCCGCCATTTCACCCCGCAACATTTTTAGCGACAAAGGTTATGCAACACAATCAGGAACTTCCATGGCCGCTCCTCATATCTCCGGCATCGTGGCTCTTCTTAAATCCGTCCATCCTAATTGGTCACCTGCTGCCATTAAATCAGCCCTCATCACCACCGCTCGTGCAAAGGACCCCTCTGGATTGCCCATTTTCGCCGAGGGCTCTCCTCCTAAAGTCGCCGACCCATTTGACTACGGCGGCGGAGTGGTGGATCCTAACGCTGCCATGGACCCAGGTCTCATCTACGATTTGGACACCACAGATTACATACATTATTACCTCTGCGGCATGGGCTATAAGCTCTCAGACATTTCTCTCCTAACCCACAGAAAAACAAAGTGCCCGTTGCCAAGGCCCTCGATTTTGGATTTGAATTTGCCCACCATTACAATACCTGCACTCACAAATTCCACTACTGTGACTCGGACAGTGACAAATGTAGGGAACTTGACCTCCATTTATAGGGCATTAATTGAGGCTCCACCAGGAACTAAAGTGACTGTGGACCCTCAGGAGTTGGCTTTTAATTCCCAAGTCAAGAAGATTTCCTTTAAGGTTACCATTTCCACTGTCCTCCATATAAATTATGGCTACTCTTTTGGAAGCTTAACTTGGACTGATGGAGTGCATCTTGTTAAAACTCCCTTGTCTGTCAGAATTCATTTCCTTTGA 2109 47.27 MNTLQHLSEMPGVVRVLRNSIYQMHTTRSWDFLGLSSSPSSDSDNLLHRGKMGDDIIIGVIDSGTLTLLLSPKISSKQLLFKYLNIRTGIWPESEAFSDKGMGPVPSRWRGRCERGEQFNWTNCNRKVIGARWYMEGFIADFGKEALATSKEYSSPRDASGHGTHVASTAAGSFVRNVSYRGHGSGTVRGGAPLARLAIYKALWLLNNQASGSSADILMAIDEAISDGVDVLSISIGGSFPLFPEFDEVNEIAIGSFHAIARGISVVCSAGNDGPRQQKVVNTAPWILTVAASTMDRAFLSPITTLGDNTTYFGQSFLNSKKDLVVQLATSLTGRCDEIFGNDTSLSGKVVICFSDLADIKTTLAAGAAVIQANGSGIIVAGQNVDILFPCRQSFPCILVDTDVGTKLFFYTLDNRNPMIRLGRAKTIIGNPISTKIAHFSSRGPNSASPAILKPDIAGPGSNIVAAISPRNIFSDKGYATQSGTSMAAPHISGIVALLKSVHPNWSPAAIKSALITTARAKDPSGLPIFAEGSPPKVADPFDYGGGVVDPNAAMDPGLIYDLDTTDYIHYYLCGMGYKLSDISLLTHRKTKCPLPRPSILDLNLPTITIPALTNSTTVTRTVTNVGNLTSIYRALIEAPPGTKVTVDPQELAFNSQVKKISFKVTISTVLHINYGYSFGSLTWTDGVHLVKTPLSVRIHFL 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11614939 11618670 - Tan0020887.3 Tan01g1193 738617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1193 702 Gene3D Peptidase S8/S53 domain 86 568 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1193 702 ProSiteProfiles Serine proteases, subtilase domain profile. 29 555 - -
Tan01g1193 702 PRINTS Subtilisin serine protease family (S8) signature 53 72 IPR015500 -
Tan01g1193 702 PRINTS Subtilisin serine protease family (S8) signature 483 499 IPR015500 -
Tan01g1193 702 PRINTS Subtilisin serine protease family (S8) signature 158 171 IPR015500 -
Tan01g1193 702 Pfam Subtilase family 53 523 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1193 702 SUPERFAMILY Subtilisin-like 24 559 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1193 702 CDD Peptidases_S8_3 22 519 IPR034197 -
Tan01g1193 702 Gene3D - 573 700 - -
Tan01g1193 702 Pfam Fibronectin type-III domain 602 697 IPR041469 -
Tan01g1193 702 ProSitePatterns Serine proteases, subtilase family, serine active site. 484 494 IPR023828 -
Tan01g1193 702 ProSitePatterns Serine proteases, subtilase family, histidine active site. 162 172 IPR022398 -
Tan01g1193 702 Gene3D - 296 429 - -
Tan01g1193 702 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 694 IPR045051 -
Tan01g1193 702 FunFam Subtilisin-like protease SBT1.5 84 307 - -
Tan01g1193 702 FunFam Subtilisin-like protease SBT1.5 573 700 - -
Tan01g1193 702 CDD PA_subtilisin_like 305 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1191 Tan-Chr1:11614939 Tan01g1193 Tan-Chr1:11614939 0.00E+00 dispersed
Tan01g1193 Tan-Chr1:11614939 Tan01g1195 Tan-Chr1:11648792 2.70E-307 dispersed
Tan01g1192 Tan-Chr1:11614939 Tan01g1193 Tan-Chr1:11614939 0.00E+00 tandem
Tan01g1193 Tan-Chr1:11614939 Tan01g1194 Tan-Chr1:11648792 2.70E-307 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1193 - - - 0.0