Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1196 ATGGTCTATCAACTTCTTTCTAATAAAACCCAAAATCTTTCTTCAGATTGCACAGCCCATCGGGGTTTCTCCATATATACCGAAAACAGAAACATGGTGAAGAAGCAAGCTTCTTTCATTGTTGCTGTTATGACATTTTATGCTTTGTTTTCAATGTTTGCTTACAAACCCATGGCAGAAGAAGCTGATCATGACCAAGATCGCAAGGTTCACATCGTTTACCTTGGAGAAAGGCAACATGATGATATTAAATTGATTACTGAGTCTCACCATGATTTATTGGCCACTGTATTGGGAAGCAAGGAGAAGTCGTTAGAATCAATGGTGTACAGTTATAGACATGGCTTTTCTGGATTTGCAGCCAAGCTCACTAAGTCTCAAGCTCAAAAGCTAGCTGAAATACCAGGGGTGATTCGAGTTTTTCCAAGTTCTGTTTACAAAATGCATACTACAAGAAGTTGGGATTTCCTTGGCCTCTCCTCTTCTCCCTATGAGTCATCAAACCTTCTTCATCGTGCTAAAATGGGCGACGATATCATTATAGGTGTCATTGATTCAGGATTCTGGCCGGAGTCAGAGTCTTTTGGAGACAAAGGATTGGGACCAGTACCATTCCGATGGAAAGGTACATGTGAATCAGGAGAAGAATTCAATTCCACAAACTGCAACAGAAAAGTGATAGGAGCTCGTTGGTACATGAAGGGCTTCGTTGCTGATTATGGGAAGGAGGCATTAGCCAACGAGTTCTTATCCCCACGAGACTTCAATGGGCACGGAACACACACAGCCAGCACAGCCGCAGGTTCATTCGTAGCAAACGTTAGCTACTATGGGCAAGCCACCGGCACGTTGAGAGGCGGCGCGCCACTCGCACGGTTGGCCATATACAAGACCATGTGGACCGAGGGCGGCAAGGGGTCAGCGGCAGACATATTGAAGGCCATGGATGAGGCCATGCATGACGGTGTGGATGTGTTGTCTATGTCGATCGGGGGTGTTATTCCTTTGTTTCCAGAGTTCAACGAAGAAAACGAAATTGCAATTGGGTCATTTCATGCTATTGCGAGAGGGATTCTTGTTGTGTGCGCGGGTGGGAATGAAGGCCCTCATCAGCAAACAGTGGTGAACACTGCGCCTTGGATTTTGACTGTGGCTGCCAGTACCATGGATAGAGCCTTTCTTTCCACCATTACTACTCTTGGATCAGATAATGCCACTTATTTGGGCCAAACCTTATTCCAGTCCAAAAAGGACCTCGTCGCCAAGTTGGCAATTTCGCCCACCCGAAGATGTGACGGCCTTTCGGAAAATGATACTTCCTTAAGTGGGAAGGTGGTTCTGTGTTTCTCTGATTTAGCCGATCCGTCGACTGCATCGACAGCGGGGACAGCGGTGATAACAGCAAATGGAAGTGGGATAATTATCGCCGGCCAACACAAAAATATCTTGTTTCCATGTAGAGAGACCTTTTCATGCATCCTAGTCGATACCGACATTGGCACTAAATTACTTTTTTACATCTTGGCCAACAGTAATCCAATGATAAGGGTGAGGCGTGCAAAAACCATCATCGGCAAGCCCATTTCAAGCAGGATAGCCTATTTCTCATCTAGAGGTCCAAATTCTGCTTCACTTGCAATTCTCAAGCCAGACATAAGCGCTCCTGGATCCAACATTGTAGCAGCCACTTCACCTTACGACACATACAACGACCATGGATTTGCAATGCAATCAGGAACTTCCATGGCGGCGCCTCATATCTCTGGCATCGTGGCTCTTCTTAAAAACGTGCATCCTAATTGGTCACCCGCTGCAATTAAATCAGCCCTCATCACCACTGGTACACGTACACACACCTCTAAACTAACACACACAAATATATTATAA 1887 45.57 MVYQLLSNKTQNLSSDCTAHRGFSIYTENRNMVKKQASFIVAVMTFYALFSMFAYKPMAEEADHDQDRKVHIVYLGERQHDDIKLITESHHDLLATVLGSKEKSLESMVYSYRHGFSGFAAKLTKSQAQKLAEIPGVIRVFPSSVYKMHTTRSWDFLGLSSSPYESSNLLHRAKMGDDIIIGVIDSGFWPESESFGDKGLGPVPFRWKGTCESGEEFNSTNCNRKVIGARWYMKGFVADYGKEALANEFLSPRDFNGHGTHTASTAAGSFVANVSYYGQATGTLRGGAPLARLAIYKTMWTEGGKGSAADILKAMDEAMHDGVDVLSMSIGGVIPLFPEFNEENEIAIGSFHAIARGILVVCAGGNEGPHQQTVVNTAPWILTVAASTMDRAFLSTITTLGSDNATYLGQTLFQSKKDLVAKLAISPTRRCDGLSENDTSLSGKVVLCFSDLADPSTASTAGTAVITANGSGIIIAGQHKNILFPCRETFSCILVDTDIGTKLLFYILANSNPMIRVRRAKTIIGKPISSRIAYFSSRGPNSASLAILKPDISAPGSNIVAATSPYDTYNDHGFAMQSGTSMAAPHISGIVALLKNVHPNWSPAAIKSALITTGTRTHTSKLTHTNIL 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11649567 11655438 - Tan0018522.2 Tan01g1196 738620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1196 628 Pfam Subtilase family 176 616 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1196 628 CDD PA_subtilisin_like 399 514 - -
Tan01g1196 628 PRINTS Subtilisin serine protease family (S8) signature 176 195 IPR015500 -
Tan01g1196 628 PRINTS Subtilisin serine protease family (S8) signature 578 594 IPR015500 -
Tan01g1196 628 PRINTS Subtilisin serine protease family (S8) signature 254 267 IPR015500 -
Tan01g1196 628 ProSiteProfiles Serine proteases, subtilase domain profile. 153 628 - -
Tan01g1196 628 Gene3D - 390 524 - -
Tan01g1196 628 SUPERFAMILY Subtilisin-like 38 621 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1196 628 CDD Peptidases_S8_3 146 613 IPR034197 -
Tan01g1196 628 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 55 149 IPR037045 -
Tan01g1196 628 Pfam Peptidase inhibitor I9 70 149 IPR010259 -
Tan01g1196 628 FunFam Subtilisin-like protease SBT5.3 59 149 - -
Tan01g1196 628 FunFam Subtilisin-like protease SBT1.5 178 419 - -
Tan01g1196 628 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 71 618 IPR045051 -
Tan01g1196 628 ProSitePatterns Serine proteases, subtilase family, serine active site. 579 589 IPR023828 -
Tan01g1196 628 Gene3D Peptidase S8/S53 domain 178 620 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1194 Tan-Chr1:11648792 Tan01g1196 Tan-Chr1:11649567 0.00E+00 dispersed
Tan01g1196 Tan-Chr1:11649567 Tan05g0300 Tan-Chr5:2244717 2.60E-120 dispersed
Tan01g1195 Tan-Chr1:11648792 Tan01g1196 Tan-Chr1:11649567 0.00E+00 tandem
Tan01g1196 Tan-Chr1:11649567 Tan01g1197 Tan-Chr1:11649567 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1196 - - - 0.0