Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1197 ATGGTGAAGAAGCAAGCTTCTTTCATTGTTGCTGTTATGACATTTTATGCTTTGTTTTCAATGTTTGCTTACAAACCCATGGCAGAAGAAGCTGATCATGACCAAGATCGCAAGGTTCACATCGTTTACCTTGGAGAAAGGCAACATGATGATATTAAATTGATTACTGAGTCTCACCATGATTTATTGGCCACTGTATTGGGAAGCAAGGAGAAGTCGTTAGAATCAATGGTGTACAGTTATAGACATGGCTTTTCTGGATTTGCAGCCAAGCTCACTAAGTCTCAAGCTCAAAAGCTAGCTGAAATACCAGGGGTGATTCGAGTTTTTCCAAGTTCTGTTTACAAAATGCATACTACAAGAAGTTGGGATTTCCTTGGCCTCTCCTCTTCTCCCTATGAGTCATCAAACCTTCTTCATCGTGCTAAAATGGGCGACGATATCATTATAGGTGTCATTGATTCAGGATTCTGGCCGGAGTCAGAGTCTTTTGGAGACAAAGGATTGGGACCAGTACCATTCCGATGGAAAGGTACATGTGAATCAGGAGAAGAATTCAATTCCACAAACTGCAACAGAAAAGTGATAGGAGCTCGTTGGTACATGAAGGGCTTCGTTGCTGATTATGGGAAGGAGGCATTAGCCAACGAGTTCTTATCCCCACGAGACTTCAATGGGCACGGAACACACACAGCCAGCACAGCCGCAGGTTCATTCGTAGCAAACGTTAGCTACTATGGGCAAGCCACCGGCACGTTGAGAGGCGGCGCGCCACTCGCACGGTTGGCCATATACAAGACCATGTGGACCGAGGGCGGCAAGGGGTCAGCGGCAGACATATTGAAGGCCATGGATGAGGCCATGCATGACGGTGTGGATGTGTTGTCTATGTCGATCGGGGGTGTTATTCCTTTGTTTCCAGAGTTCAACGAAGAAAACGAAATTGCAATTGGGTCATTTCATGCTATTGCGAGAGGGATTCTTGTTGTGTGCGCGGGTGGGAATGAAGGCCCTCATCAGCAAACAGTGGTGAACACTGCGCCTTGGATTTTGACTGTGGCTGCCAGTACCATGGATAGAGCCTTTCTTTCCACCATTACTACTCTTGGATCAGATAATGCCACTTATTTGGGCCAAACCTTATTCCAGTCCAAAAAGGACCTCGTCGCCAAGTTGGCAATTTCGCCCACCCGAAGATGTGACGGCCTTTCGGAAAATGATACTTCCTTAAGTGGGAAGGTGGTTCTGTGTTTCTCTGATTTAGCCGATCCGTCGACTGCATCGACAGCGGGGACAGCGGTGATAACAGCAAATGGAAGTGGGATAATTATCGCCGGCCAACACAAAAATATCTTGTTTCCATGTAGAGAGACCTTTTCATGCATCCTAGTCGATACCGACATTGGCACTAAATTACTTTTTTACATCTTGGCCAACAGTAATCCAATGATAAGGGTGAGGCGTGCAAAAACCATCATCGGCAAGCCCATTTCAAGCAGGATAGCCTATTTCTCATCTAGAGGTCCAAATTCTGCTTCACTTGCAATTCTCAAGCCAGACATAAGCGCTCCTGGATCCAACATTGTAGCAGCCACTTCACCTTACGACACATACAACGACCATGGATTTGCAATGCAATCAGGAACTTCCATGGCGGCGCCTCATATCTCTGGCATCGTGGCTCTTCTTAAAAACGTGCATCCTAATTGGTCACCCGCTGCAATTAAATCAGCCCTCATCACCACTGGTACACGTACACACACCTCTAAACTAACACACACAAATATATTATAA 1794 45.99 MVKKQASFIVAVMTFYALFSMFAYKPMAEEADHDQDRKVHIVYLGERQHDDIKLITESHHDLLATVLGSKEKSLESMVYSYRHGFSGFAAKLTKSQAQKLAEIPGVIRVFPSSVYKMHTTRSWDFLGLSSSPYESSNLLHRAKMGDDIIIGVIDSGFWPESESFGDKGLGPVPFRWKGTCESGEEFNSTNCNRKVIGARWYMKGFVADYGKEALANEFLSPRDFNGHGTHTASTAAGSFVANVSYYGQATGTLRGGAPLARLAIYKTMWTEGGKGSAADILKAMDEAMHDGVDVLSMSIGGVIPLFPEFNEENEIAIGSFHAIARGILVVCAGGNEGPHQQTVVNTAPWILTVAASTMDRAFLSTITTLGSDNATYLGQTLFQSKKDLVAKLAISPTRRCDGLSENDTSLSGKVVLCFSDLADPSTASTAGTAVITANGSGIIIAGQHKNILFPCRETFSCILVDTDIGTKLLFYILANSNPMIRVRRAKTIIGKPISSRIAYFSSRGPNSASLAILKPDISAPGSNIVAATSPYDTYNDHGFAMQSGTSMAAPHISGIVALLKNVHPNWSPAAIKSALITTGTRTHTSKLTHTNIL 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11649567 11655438 - Tan0018522.4 Tan01g1197 738621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1197 597 Gene3D Peptidase S8/S53 domain 147 589 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1197 597 Pfam Peptidase inhibitor I9 39 118 IPR010259 -
Tan01g1197 597 Pfam Subtilase family 145 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g1197 597 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Tan01g1197 597 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Tan01g1197 597 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Tan01g1197 597 CDD PA_subtilisin_like 368 483 - -
Tan01g1197 597 FunFam Subtilisin-like protease SBT1.5 147 388 - -
Tan01g1197 597 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Tan01g1197 597 Gene3D - 359 493 - -
Tan01g1197 597 SUPERFAMILY Subtilisin-like 9 590 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g1197 597 CDD Peptidases_S8_3 115 582 IPR034197 -
Tan01g1197 597 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 118 IPR037045 -
Tan01g1197 597 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 587 IPR045051 -
Tan01g1197 597 ProSiteProfiles Serine proteases, subtilase domain profile. 122 597 - -
Tan01g1197 597 FunFam Subtilisin-like protease SBT5.3 28 118 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1195 Tan-Chr1:11648792 Tan01g1197 Tan-Chr1:11649567 0.00E+00 dispersed
Tan01g1197 Tan-Chr1:11649567 Tan05g0300 Tan-Chr5:2244717 2.50E-120 dispersed
Tan01g1196 Tan-Chr1:11649567 Tan01g1197 Tan-Chr1:11649567 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1197 - - - 0.0