Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1261 ATGGCTCGATCTCGAAGCTTTCTCTTCGTTTTTGCTCTTCTTTCCTTCGCTTCGGTTTGTTTCTCTCACAAAATCGGTGGCGGTGGCGGTTATGGCGGTTATTTGTATCCTCAATTCTATGATCATTCTTGTCCAAGAGCTCAAGAGATAGTGAAATCCATTGTGGCTAAAGCTTTTGCTAAGGAAGCTCGTATCGCTGCTTCATTGATTAGGCTTCATTTCCATGATTGTTTTGTCAAGGGCTGTGATGGTTCAGTGTTGTTAGATAGCAGTGGGAAATTCGCCAGTGAAAAAAGGTCCAATCCAAACAGGAACTCTGCTAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCCCAAACTGTTTCCTGTGCTGATATCTTGACCATCGCTGCAAGAGACTCCACTGTCATAACAGGAGGACCCAGTTGGGAAGTTCCACTAGGAAGAAGAGACTCAAGAGGAGCAAGTCTAAGTGGCTCTAACAATGACATCCCTGCTCCAAACAACACATTCCAAACCATTCTCACAAAATTCAAGAGACAAGGCCTTGACATTGTTGATCTTGTTGCCCTTTCAGGAAGCCACACCGATGGAAACTCTCGATGCACCAGCTTCAGGCAACGGCTCTACAACCAATCTGGCAATGCCGAGCCCGACCCTTCTCTCGATGCATCGTACGCTGCTGAATTGCGCAAGCGATGCCCGAGATCGGGGGGTGATCAGAACCTCTTTTTCCTGGACTTCGTCAGCCCAACGAAGTTCGACAACTACTACTTCAAGAACCTTTTGGCTGGAAAGGGTCTGCTGAACTCGGATCAAGTCCTGTTGACGAAGAACCAACAATCGGCAGAGTTGGTGAGGACATATGCAGAGAATTCAGAGCTCTTTTTTGAGCAATTTGCCAAGTCTATGGTTAAGATGGGGAACATTTCCCCTCTTACTGGTTCAAGGGGAGAGATCAGAAAGAACTGCAGGAAAGTTAACAAAAATTAG 1014 46.15 MARSRSFLFVFALLSFASVCFSHKIGGGGGYGGYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLIRLHFHDCFVKGCDGSVLLDSSGKFASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILTIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTDGNSRCTSFRQRLYNQSGNAEPDPSLDASYAAELRKRCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAGKGLLNSDQVLLTKNQQSAELVRTYAENSELFFEQFAKSMVKMGNISPLTGSRGEIRKNCRKVNKN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12218506 12220587 + Tan0003885.1 Tan01g1261 738685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1261 337 ProSiteProfiles Plant heme peroxidase family profile. 34 335 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 CDD secretory_peroxidase 35 334 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan01g1261 337 Gene3D - 39 335 - -
Tan01g1261 337 Gene3D Peroxidase, domain 2 172 315 - -
Tan01g1261 337 MobiDBLite consensus disorder prediction 149 170 - -
Tan01g1261 337 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 Pfam Peroxidase 51 299 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 SUPERFAMILY Heme-dependent peroxidases 35 335 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 FunFam Peroxidase 172 314 - -
Tan01g1261 337 PANTHER PEROXIDASE 72-RELATED 9 334 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 FunFam Peroxidase 38 180 - -
Tan01g1261 337 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1261 337 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1261 Tan-Chr1:12218506 Tan07g1935 Tan-Chr7:71119881 1.30E-89 dispersed
Tan08g1895 Tan-Chr8:71286854 Tan01g1261 Tan-Chr1:12218506 2.20E-51 dispersed
Tan01g1385 Tan-Chr1:13775572 Tan01g1261 Tan-Chr1:12218506 1.50E-76 transposed
Tan05g3019 Tan-Chr5:82086648 Tan01g1261 Tan-Chr1:12218506 2.40E-67 transposed
Tan01g1261 Tan-Chr1:12218506 Tan03g2030 Tan-Chr3:75315168 2.70E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1261 K00430 - csv:101223204 593.193