Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g1281 | ATGGATTTGGATTTGGATTTGGAAAAGTTTCCCATTTCACCGATTCTGTTCATCATCGTCCCAGCTGTAGTGCTTCTTATACTCAGTTCAGTTTTCCGGCGGCGGCGGCTGCCACTCCCTCCGGGGCCTAAAGGGCTGCCCCTGATCGGCAATATGCTGATGATAGACCAACTGACCCACCGTGGACTCGCCGCCATGGCCAAACTTTACGGTGGTATCTTCCACCTCCGCATCGGCTTCCTCCCCATGGTCGCCGTTTCCGACCCCGACGTTGCTCGGAACGTTCTTCAGGTACAAGACATGGTCTTCTCAAATCGTCCCGCAACGGAAGCCATCAGCTACTTGACATACGATCGAGCCGACATGGCCTTTGCTCACTATGGTCCTTTTTGGCGACAAATGCGTAAACTTTGTGTCATGAAAATATTTAGCCGCAAGCATACTGAGTCATGGGCATCCGTGAGAGATGAGGTCAATAATCTTGTCCAAACCATCGCGAACAGCACTGGAACCACTGTGAACATTGGTGAGTTGGTCTTCACAATGACAATGAATATTATATACAGAGCAGCGTTTGGGACTATCGAACGAGAAGGCCAAAGTGAATTCATCAAAATACTTCAAGAATTCTCTAAGCTTTTCGGAGCTTTTAATATTGTTGATTTTATCCCTTATATTGGTTGGATTATTGATCCACAAGGTCTCACTAGTAGACTCGTCAAAGCTCGTCAGTCACTCGATCGATTTATTGATACAATCATTGACGAACACTTACAGAAAAGGAATAAAGTTGGCACCGATATGGTTGATGAGTTGCTAGCTTTTTACAATATTGAAGGAGGAGGAGAAACTAAAGGGGAATTGGAGGATTTACAAAGCCCCATTAAACTCACTAGAGACAACATCAAAGCCATCATCATGGATGTGATGTTCGGCGGCACAGAAACAGTGGCCTCCGCCATAGAATGGGCCATGTCGGAGCTCATGAAGAACCCCGACGACCTCAACAAACTCCAACAATTACTCGCCGCCGCCGTCGGCCTTCACCGTCGGCCACAAGAATCCGACTTCGAGAACATAACATACCTGAAATGCGTTCTCAAAGAAACTCTCCGGCTCCACCCGCCCATCCCGCTCCTTCTCCACGAGACGGCGGCGGACGCGGAAGTCGCCGGTTATCGGATTCCGGCGAAGTCCCGCGTCGTCATCAATGCGTGGGCCATCGGGCGGGACGAAAAGTCGTGGGTGGACCCCAACAGTTTCCGGCCGGCGAGGTTTCACAGAGACGACGCCGCCGACTTCAAAGGCGGCAACTTTGAGTTCATTCCGTTCGGGTCGGGTCGGAGGTCTTGCCCCGGAATGCAGCTGGGGCTTTACGCGGTGGAGATGGCCGTGGCGAATTTGGTGCATTGTTTCCGGTGGGAGCTGCCGGACGGAATGAAGCCGGCCGAGTTGGACATGAACGACATTTTTGGACTCACTGCTCCCAGAGCGAGTCGACTCGTCGCTGTTCCGTTCAAGAGAGTTTCTTGTTTGGACTGA | 1542 | 50.97 | MDLDLDLEKFPISPILFIIVPAVVLLILSSVFRRRRLPLPPGPKGLPLIGNMLMIDQLTHRGLAAMAKLYGGIFHLRIGFLPMVAVSDPDVARNVLQVQDMVFSNRPATEAISYLTYDRADMAFAHYGPFWRQMRKLCVMKIFSRKHTESWASVRDEVNNLVQTIANSTGTTVNIGELVFTMTMNIIYRAAFGTIEREGQSEFIKILQEFSKLFGAFNIVDFIPYIGWIIDPQGLTSRLVKARQSLDRFIDTIIDEHLQKRNKVGTDMVDELLAFYNIEGGGETKGELEDLQSPIKLTRDNIKAIIMDVMFGGTETVASAIEWAMSELMKNPDDLNKLQQLLAAAVGLHRRPQESDFENITYLKCVLKETLRLHPPIPLLLHETAADAEVAGYRIPAKSRVVINAWAIGRDEKSWVDPNSFRPARFHRDDAADFKGGNFEFIPFGSGRRSCPGMQLGLYAVEMAVANLVHCFRWELPDGMKPAELDMNDIFGLTAPRASRLVAVPFKRVSCLD | 513 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 12513041 | 12516015 | - | Tan0014712.1 | Tan01g1281 | 738705 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g1281 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 91 | 112 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | Gene3D | Cytochrome P450 | 31 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | PANTHER | CYTOCHROME P450 84A1-RELATED | 14 | 511 | IPR053062 | GO:0004497(PANTHER) | |
| Tan01g1281 | 513 | FunFam | Cytochrome P450 84A1 | 32 | 507 | - | - | |
| Tan01g1281 | 513 | Pfam | Cytochrome P450 | 40 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g1281 | 513 | CDD | CYP71-like | 70 | 501 | - | - | |
| Tan01g1281 | 513 | SUPERFAMILY | Cytochrome P450 | 32 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1281 | Tan-Chr1:12513041 | Tan02g0759 | Tan-Chr2:7176576 | 1.30E-183 | dispersed | |
| Tan01g1281 | Tan-Chr1:12513041 | Tan03g2051 | Tan-Chr3:75473700 | 2.00E-211 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g1281 | K09755 | - | mdm:103400991 | 729.169 |