Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1281 ATGGATTTGGATTTGGATTTGGAAAAGTTTCCCATTTCACCGATTCTGTTCATCATCGTCCCAGCTGTAGTGCTTCTTATACTCAGTTCAGTTTTCCGGCGGCGGCGGCTGCCACTCCCTCCGGGGCCTAAAGGGCTGCCCCTGATCGGCAATATGCTGATGATAGACCAACTGACCCACCGTGGACTCGCCGCCATGGCCAAACTTTACGGTGGTATCTTCCACCTCCGCATCGGCTTCCTCCCCATGGTCGCCGTTTCCGACCCCGACGTTGCTCGGAACGTTCTTCAGGTACAAGACATGGTCTTCTCAAATCGTCCCGCAACGGAAGCCATCAGCTACTTGACATACGATCGAGCCGACATGGCCTTTGCTCACTATGGTCCTTTTTGGCGACAAATGCGTAAACTTTGTGTCATGAAAATATTTAGCCGCAAGCATACTGAGTCATGGGCATCCGTGAGAGATGAGGTCAATAATCTTGTCCAAACCATCGCGAACAGCACTGGAACCACTGTGAACATTGGTGAGTTGGTCTTCACAATGACAATGAATATTATATACAGAGCAGCGTTTGGGACTATCGAACGAGAAGGCCAAAGTGAATTCATCAAAATACTTCAAGAATTCTCTAAGCTTTTCGGAGCTTTTAATATTGTTGATTTTATCCCTTATATTGGTTGGATTATTGATCCACAAGGTCTCACTAGTAGACTCGTCAAAGCTCGTCAGTCACTCGATCGATTTATTGATACAATCATTGACGAACACTTACAGAAAAGGAATAAAGTTGGCACCGATATGGTTGATGAGTTGCTAGCTTTTTACAATATTGAAGGAGGAGGAGAAACTAAAGGGGAATTGGAGGATTTACAAAGCCCCATTAAACTCACTAGAGACAACATCAAAGCCATCATCATGGATGTGATGTTCGGCGGCACAGAAACAGTGGCCTCCGCCATAGAATGGGCCATGTCGGAGCTCATGAAGAACCCCGACGACCTCAACAAACTCCAACAATTACTCGCCGCCGCCGTCGGCCTTCACCGTCGGCCACAAGAATCCGACTTCGAGAACATAACATACCTGAAATGCGTTCTCAAAGAAACTCTCCGGCTCCACCCGCCCATCCCGCTCCTTCTCCACGAGACGGCGGCGGACGCGGAAGTCGCCGGTTATCGGATTCCGGCGAAGTCCCGCGTCGTCATCAATGCGTGGGCCATCGGGCGGGACGAAAAGTCGTGGGTGGACCCCAACAGTTTCCGGCCGGCGAGGTTTCACAGAGACGACGCCGCCGACTTCAAAGGCGGCAACTTTGAGTTCATTCCGTTCGGGTCGGGTCGGAGGTCTTGCCCCGGAATGCAGCTGGGGCTTTACGCGGTGGAGATGGCCGTGGCGAATTTGGTGCATTGTTTCCGGTGGGAGCTGCCGGACGGAATGAAGCCGGCCGAGTTGGACATGAACGACATTTTTGGACTCACTGCTCCCAGAGCGAGTCGACTCGTCGCTGTTCCGTTCAAGAGAGTTTCTTGTTTGGACTGA 1542 50.97 MDLDLDLEKFPISPILFIIVPAVVLLILSSVFRRRRLPLPPGPKGLPLIGNMLMIDQLTHRGLAAMAKLYGGIFHLRIGFLPMVAVSDPDVARNVLQVQDMVFSNRPATEAISYLTYDRADMAFAHYGPFWRQMRKLCVMKIFSRKHTESWASVRDEVNNLVQTIANSTGTTVNIGELVFTMTMNIIYRAAFGTIEREGQSEFIKILQEFSKLFGAFNIVDFIPYIGWIIDPQGLTSRLVKARQSLDRFIDTIIDEHLQKRNKVGTDMVDELLAFYNIEGGGETKGELEDLQSPIKLTRDNIKAIIMDVMFGGTETVASAIEWAMSELMKNPDDLNKLQQLLAAAVGLHRRPQESDFENITYLKCVLKETLRLHPPIPLLLHETAADAEVAGYRIPAKSRVVINAWAIGRDEKSWVDPNSFRPARFHRDDAADFKGGNFEFIPFGSGRRSCPGMQLGLYAVEMAVANLVHCFRWELPDGMKPAELDMNDIFGLTAPRASRLVAVPFKRVSCLD 513
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 12513041 12516015 - Tan0014712.1 Tan01g1281 738705
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1281 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 Gene3D Cytochrome P450 31 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 PANTHER CYTOCHROME P450 84A1-RELATED 14 511 IPR053062 GO:0004497(PANTHER)
Tan01g1281 513 FunFam Cytochrome P450 84A1 32 507 - -
Tan01g1281 513 Pfam Cytochrome P450 40 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1281 513 CDD CYP71-like 70 501 - -
Tan01g1281 513 SUPERFAMILY Cytochrome P450 32 508 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1281 Tan-Chr1:12513041 Tan02g0759 Tan-Chr2:7176576 1.30E-183 dispersed
Tan01g1281 Tan-Chr1:12513041 Tan03g2051 Tan-Chr3:75473700 2.00E-211 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1281 K09755 - mdm:103400991 729.169