Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1284 ATGACTCCGAAATCTTGGAACAGAAAAAAATATATATACAGAAGGAAGAAAAAAAAAACCCACAAAAATAAAATCAAAACAAGTTTTCGAGTTGAAAATTTTAATCTGTCTTTCGAGTCCAAAAAACAGAGGCGGGGCTCTGCAAAAATGGAAACCAATTTGGAGGAGCTGAGGCAAAGCTTCAGAAGTGGAAGAACAAGGAGTCTGGAATGGAGGAAAAACCAGCTGATTTCTTTGATTCAGTTCATCCACGACAAAGAAAACGCCATTTTTGAAGCTCTATATCAAGATCTTGGGAAGCATCCTGTGGAAATTTTTCGAGATGAGGTTGGAGTTGTTCTGAAATCTGCAAACAATGCTTTGTGCTGTTTAAAGAAATGGATGGCTCCTAAAAAGAAATATGTGCCATTACTGTTCTACCCAGCAAAAGGAGAAGTTTTGTCTGAGCCATTTGGTTTGGTCCTCATAATTTCATCTTGGAACTTTCCCCTTTCTTTGGCATTGGATCCGTTAATTGGAGCGATATCAGCAGGCAACACGGCTGTTTTAAAACTGTCGGAATATGCCCCGGCGTGCTCCTCTTTGCTTTCTGCAACACTCCCTCTATACCTTGACAATGAAGCCATCAAGATTGTGGAGGGTGGAGCTGATGCTAGTGAACAACTTCTGCAGCACAAGTGGGATAAGATCTTTTTCACAGGGAGTTCGAGGATAGGGAGGACTGTGATGACTGCAGCTGCAAAGCATTTAACTCCTGTTACTTTAGAGCTTGGGGGAAAATGCCCTGCAATCTTTGATTACTCCTCTGTTTATTCCAATATGAAGGTAGCGGTCAAGAGAATTGTCGGAGGAAAATGGGGGCCGTGCTCGGGGCAGGCATGCATAGGGATAGATTATGTGCTTGTGGAGGATAAGTTTGCTTCAGAATTGATCGAGTCGTTAAAGCGAATAATCAAGAAGTTTTATGGAGAAAACTCGAAAAACTCGATTAGCCTAGCCAGAATTGTTAATGAGCAACATGTTGAAAGAATTAGCAATCTTCTCAAAGACCCCAAGGTTGCTGCTTCCATTGTCCATGGTGGTTTCATAGACAAACAAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCGTTGGATGCCGACATCATGACCGAAGAAATCTTCGGTCCCCTGTTACCGATAATCACATTGAACAAAATTGAAGAAAGCATAGAGTTCATCAACTCAAGACCAAAACCTCTAGCTCTTTACGCCTTCACTGAAGACAAAACTCTCAAGAAACGGATTCTATCCGAAACATCATCAGGAAGTGTCACATTCAATGATACCATGGTTCAGTTCGTGTGCGATTCGCTACCATTCGGCGGTGTTGGTCCGAGCGGTTTCGGTAGTTACCATGGCAAGTATTCTTTTGATACATTCAGCCATGAAAAAGCAGTGTTGCAGAGAAGCTTTTGGTTAGAACTCGAACCACGATATCCGCCATGGAACGATTTCAAGCTCAAGTTCATCAGATTGGCGTATCGATTCGACTATTTCGGGTTGGTACTGCTTCTTTTGGGGTTAAAAAAGTAG 1581 41.94 MTPKSWNRKKYIYRRKKKKTHKNKIKTSFRVENFNLSFESKKQRRGSAKMETNLEELRQSFRSGRTRSLEWRKNQLISLIQFIHDKENAIFEALYQDLGKHPVEIFRDEVGVVLKSANNALCCLKKWMAPKKKYVPLLFYPAKGEVLSEPFGLVLIISSWNFPLSLALDPLIGAISAGNTAVLKLSEYAPACSSLLSATLPLYLDNEAIKIVEGGADASEQLLQHKWDKIFFTGSSRIGRTVMTAAAKHLTPVTLELGGKCPAIFDYSSVYSNMKVAVKRIVGGKWGPCSGQACIGIDYVLVEDKFASELIESLKRIIKKFYGENSKNSISLARIVNEQHVERISNLLKDPKVAASIVHGGFIDKQKLFIEPTILLNPPLDADIMTEEIFGPLLPIITLNKIEESIEFINSRPKPLALYAFTEDKTLKKRILSETSSGSVTFNDTMVQFVCDSLPFGGVGPSGFGSYHGKYSFDTFSHEKAVLQRSFWLELEPRYPPWNDFKLKFIRLAYRFDYFGLVLLLLGLKK 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12598478 12603586 + Tan0003795.1 Tan01g1284 738708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1284 526 FunFam Aldehyde dehydrogenase 58 271 - -
Tan01g1284 526 PIRSF ALDH 19 519 IPR012394 GO:0006081(InterPro)
Tan01g1284 526 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 259 462 IPR016163 GO:0016620(InterPro)
Tan01g1284 526 PANTHER ALDEHYDE DEHYDROGENASE 48 523 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Tan01g1284 526 FunFam Aldehyde dehydrogenase 259 462 - -
Tan01g1284 526 Pfam Aldehyde dehydrogenase family 45 482 IPR015590 GO:0016491(InterPro)
Tan01g1284 526 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 480 IPR016162 GO:0016491(InterPro)
Tan01g1284 526 SUPERFAMILY ALDH-like 53 498 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1284 Tan-Chr1:12598478 Tan07g0743 Tan-Chr7:11833641 1.40E-167 dispersed
Tan01g1284 Tan-Chr1:12598478 Tan01g1285 Tan-Chr1:12598478 1.40E-255 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1284 K00128 - csv:101221321 814.298