Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1285 ATGACTCCGAAATCTTGGAACAGAAAAAAATATATATACAGAAGGAAGAAAAAAAAAACCCACAAAAATAAAATCAAAACAAGTTTTCGAGTTGAAAATTTTAATCTGTCTTTCGAGTCCAAAAAACAGAGGCGGGGCTCTGCAAAAATGGAAACCAATTTGGAGGAGCTGAGGCAAAGCTTCAGAAGTGGAAGAACAAGGAGTCTGGAATGGAGGAAAAACCAGCTGATTTCTTTGATTCAGTTCATCCACGACAAAGAAAACGCCATTTTTGAAGCTCTATATCAAGATCTTGGGAAGCATCCTGTGGAAATTTTTCGAGATGAGGTTGGAGTTGTTCTGAAATCTGCAAACAATGCTTTGTGCTGTTTAAAGAAATGGATGGCTCCTAAAAAGAAATATGTGCCATTACTGTTCTACCCAGCAAAAGGAGAAGTTTTGTCTGAGCCATTTGGTTTGGTCCTCATAATTTCATCTTGGAACTTTCCCCTTTCTTTGGCATTGGATCCGTTAATTGGAGCGATATCAGCAGGCAACACGGCTGTTTTAAAACTGTCGGAATATGCCCCGGCGTGCTCCTCTTTGCTTTCTGCAACACTCCCTCTATACCTTGACAATGAAGCCATCAAGATTGTGGAGGGTGGAGCTGATGCTAGTGAACAACTTCTGCAGCACAAGTGGGATAAGATCTTTTTCACAGGGAGTTCGAGGATAGGGAGGACTGTGATGACTGCAGCTGCAAAGCATTTAACTCCTGTTACTTTAGAGCTTGGGGGAAAATGCCCTGCAATCTTTGATTACTCCTCTGTTTATTCCAATATGAAGGTAGCGGTCAAGAGAATTGTCGGAGGAAAATGGGGGCCGTGCTCGGGGCAGGCATGCATAGGGATAGATTATGTGCTTGTGGAGGATAAGTTTGCTTCAGAATTGATCGAGTCGTTAAAGCGAATAATCAAGAAGTTTTATGGAGAAAACTCGAAAAACTCGATTAGCCTAGCCAGAATTGTTAATGAGCAACATGTTGAAAGAATTAGCAATCTTCTCAAAGACCCCAAGGTTGCTGCTTCCATTGTCCATGGTGGTTTCATAGACAAACAAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCGTTGGATGCCGACATCATGACCGAAGAAATCTTCGGTCCCCTGTTACCGATAATCACATTGAACAAAATTGAAGAAAGCATAGAGTTCATCAACTCAAGACCAAAACCTCTAGCTCTTTACGCCTTCACTGAAGACAAAACTCTCAAGAAACGGATTCTATCCGAAACATCATCAGGAAGTGTCACATTCAATGATACCATGGTTCAGGTATTCTGTTCTTTCTGTTGGGTTTTGACAATATATTAG 1383 41.07 MTPKSWNRKKYIYRRKKKKTHKNKIKTSFRVENFNLSFESKKQRRGSAKMETNLEELRQSFRSGRTRSLEWRKNQLISLIQFIHDKENAIFEALYQDLGKHPVEIFRDEVGVVLKSANNALCCLKKWMAPKKKYVPLLFYPAKGEVLSEPFGLVLIISSWNFPLSLALDPLIGAISAGNTAVLKLSEYAPACSSLLSATLPLYLDNEAIKIVEGGADASEQLLQHKWDKIFFTGSSRIGRTVMTAAAKHLTPVTLELGGKCPAIFDYSSVYSNMKVAVKRIVGGKWGPCSGQACIGIDYVLVEDKFASELIESLKRIIKKFYGENSKNSISLARIVNEQHVERISNLLKDPKVAASIVHGGFIDKQKLFIEPTILLNPPLDADIMTEEIFGPLLPIITLNKIEESIEFINSRPKPLALYAFTEDKTLKKRILSETSSGSVTFNDTMVQVFCSFCWVLTIY 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12598478 12601468 + Tan0003795.2 Tan01g1285 738709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1285 460 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 259 450 IPR016163 GO:0016620(InterPro)
Tan01g1285 460 FunFam Aldehyde dehydrogenase 58 271 - -
Tan01g1285 460 PANTHER ALDEHYDE DEHYDROGENASE 48 451 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Tan01g1285 460 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 258 IPR016162 GO:0016491(InterPro)
Tan01g1285 460 FunFam Aldehyde dehydrogenase 259 454 - -
Tan01g1285 460 Pfam Aldehyde dehydrogenase family 45 447 IPR015590 GO:0016491(InterPro)
Tan01g1285 460 SUPERFAMILY ALDH-like 53 450 IPR016161 GO:0016491(InterPro)
Tan01g1285 460 PIRSF ALDH 18 453 IPR012394 GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1285 Tan-Chr1:12598478 Tan07g0743 Tan-Chr7:11833641 9.40E-136 dispersed
Tan01g1284 Tan-Chr1:12598478 Tan01g1285 Tan-Chr1:12598478 1.40E-255 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1285 K00128 - csv:101221321 689.878