Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1305 | ATGAGTTCAACATTTGATGAGACTGCTCCGGGTCCAGACTCTCAGTCTACACCCGTCGCTCCAACGCCAGATTCGCCGTCGCCACCGTCTCCCGATACCAATGCCGATGCCGATCGCTCTCCACCACCATCACCTTCAAACGACGACTCCTCCGATTCCTCTCCGCCATCAGAGAAATCTCCATCACCGAAGTCGCCGTCAAAGGGCTCCTCCGACGATAACAAATCCCCTCCAGCTCCAAAAGCAGGAAGCCCGCGATCACCGCCGGTCGTTTCCCGATCTCCTCCATCTCGATCTTCATCTCCATCAGATGCATTGCCTCCACCAGCTCCGAAGAGATCGCCGGGAGCAAAACAACAAGCACCGCCATCAGACGCCGATGATTCGGGGCCGTCGGAGGTCAATGCAGGAGTTATAATTGGGGTTGCGGTGGGGGTGGGAGTATTCATAATTGCCCTCATATCAATAATTGCAGTCTGTTCCAAGAAGAAGAAGAGAAAGGGAGATCCTATGCAATATTATGGAGATCATGGCAATGGACCTAAAGGTGGTCATGACTATTACAACAGTTCACAGCAACCAAACTGGCACAACAACGGCATGCACGGTCCCGGGACGGACCAATTTGGGAGGCCACCGGTATCGGGGTCTCCGCCTGGGAGCGGGTGGCCGCCGATGAACAGCGATAACATATCGATGAGCAGCGCGTACATGGGCCCTCCTCTTCCTCCACCATCACCCGCGATTGCCTTCGGGTTCAACAAGAGCACGTTCACGTACGACGAGCTTGCAGCAGCAACGAGCGGGTTCGCGCACGGGAACCTGCTCGGGCAGGGCGGGTTCGGGTACGTGCACAAGGGCGTGCTGCCGAACGGGAAGGAGGTTGCGGTGAAGAGCCTGAAGGTGGGCAGCGGGCAAGGGGAGAGGGAGTTCATGGCTGAGGTTGAGATTATTAGCAGAGTCCACCATAGGCATTTGGTGTCTTTGGTTGGCTTTTGCATTGCTGGTGGACAAAGAATGTTGGTCTATGAGTTTGTTCCTAACAACACCTTGGAGCATCACCTTCATGATAAAAGTCTTCCAGTGATGGATTGGTCAACCAGACTTCGTATTGCCATAGGTTCTGCAAAGGGTCTTGCTTACCTTCATGAAGATTGTCATCCAAAGATTATTCACCGAGATATCAAAACAGCTAATATCCTGATTGATGCCAACTTTGAAGCAATGGTGGCAGATTTTGGATTAGCCAAGTTGTCTTCAGATAATCACACTCATGTCTCCACCAGGGTTATGGGTACATTTGGGTATTTGGCGCCAGAATATGCATCAAGTGGGAAGCTGACAGAGAAGTCTGACGTGTTCTCATTTGGTGTAATGTTATTGGAACTCATTACCGGGAACCGACCTGTGGACCCCACTCATGCCATGGAGGATAGCTTAGTCGACTGGGCGCGACCACTCATGAATCGGGCATTGGGAGAAGGTATCTATGAAGAGTTGGTAGATATGCGGTTAGAAAATCAATTCAACACTCAGGAGATGGCTCGTATGGTGGCGTGTGCTGCTGCCTCCATCCGTCACTCCGCTAGAAAACGCCCTAAAATGAGCCAGGTTGTACGTGCCTTAGAAGGGGATGTTTCATTAGATGATCTAAATGAAGGGATAAGACCAGGTCAAAGCTCCATTTATAGTGTGACCAGCTCAGACTACGATTCAAGTGCATACCATGCTGACATGTCGAAATTCAGGAAAATAGCTTTGTCGGACGACAGCAGCGAGCATGCAACTTCTAGTAATGATTCAAGAGAGATGAACCATCCTGGAACCCAAAAGCCGCTATTTTGA | 1845 | 51.06 | MSSTFDETAPGPDSQSTPVAPTPDSPSPPSPDTNADADRSPPPSPSNDDSSDSSPPSEKSPSPKSPSKGSSDDNKSPPAPKAGSPRSPPVVSRSPPSRSSSPSDALPPPAPKRSPGAKQQAPPSDADDSGPSEVNAGVIIGVAVGVGVFIIALISIIAVCSKKKKRKGDPMQYYGDHGNGPKGGHDYYNSSQQPNWHNNGMHGPGTDQFGRPPVSGSPPGSGWPPMNSDNISMSSAYMGPPLPPPSPAIAFGFNKSTFTYDELAAATSGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKVGSGQGEREFMAEVEIISRVHHRHLVSLVGFCIAGGQRMLVYEFVPNNTLEHHLHDKSLPVMDWSTRLRIAIGSAKGLAYLHEDCHPKIIHRDIKTANILIDANFEAMVADFGLAKLSSDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGNRPVDPTHAMEDSLVDWARPLMNRALGEGIYEELVDMRLENQFNTQEMARMVACAAASIRHSARKRPKMSQVVRALEGDVSLDDLNEGIRPGQSSIYSVTSSDYDSSAYHADMSKFRKIALSDDSSEHATSSNDSREMNHPGTQKPLF | 614 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12805737 | 12811640 | + | Tan0003702.1 | Tan01g1305 | 738729 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1305 | 614 | MobiDBLite | consensus disorder prediction | 101 | 116 | - | - | |
Tan01g1305 | 614 | MobiDBLite | consensus disorder prediction | 1 | 132 | - | - | |
Tan01g1305 | 614 | Gene3D | Transferase(Phosphotransferase) domain 1 | 346 | 553 | - | - | |
Tan01g1305 | 614 | FunFam | proline-rich receptor-like protein kinase PERK1 | 248 | 345 | - | - | |
Tan01g1305 | 614 | SUPERFAMILY | Protein kinase-like (PK-like) | 244 | 542 | IPR011009 | - | |
Tan01g1305 | 614 | ProSitePatterns | Protein kinases ATP-binding region signature. | 276 | 298 | IPR017441 | GO:0005524(InterPro) | |
Tan01g1305 | 614 | CDD | STKc_IRAK | 276 | 544 | - | - | |
Tan01g1305 | 614 | MobiDBLite | consensus disorder prediction | 39 | 74 | - | - | |
Tan01g1305 | 614 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 346 | 553 | - | - | |
Tan01g1305 | 614 | MobiDBLite | consensus disorder prediction | 588 | 614 | - | - | |
Tan01g1305 | 614 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Tan01g1305 | 614 | MobiDBLite | consensus disorder prediction | 193 | 228 | - | - | |
Tan01g1305 | 614 | MobiDBLite | consensus disorder prediction | 16 | 38 | - | - | |
Tan01g1305 | 614 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 390 | 402 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g1305 | 614 | SMART | serkin_6 | 270 | 531 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1305 | 614 | Pfam | Protein tyrosine and serine/threonine kinase | 274 | 541 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g1305 | 614 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 107 | 585 | IPR047117 | - | |
Tan01g1305 | 614 | Gene3D | Phosphorylase Kinase; domain 1 | 246 | 345 | - | - | |
Tan01g1305 | 614 | ProSiteProfiles | Protein kinase domain profile. | 270 | 548 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1305 | Tan-Chr1:12805737 | Tan05g1321 | Tan-Chr5:16492719 | 4.40E-157 | dispersed | |
Tan01g1305 | Tan-Chr1:12805737 | Tan08g0167 | Tan-Chr8:1415873 | 8.60E-153 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67016 | PF07714 | PK_Tyr_Ser-Thr | 1.80E-47 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1305 | - | - | - | 0.0 |