Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1307 ATGTTTCATCCAGGGCTTTTACTCTGTTTTCTCCCCTCTGTTTTAGTCCTCTCCCTCTTCGTGATTCTGCTCCGGAGGAAGAGAAATGCCGTTGATCTTCCTCCCGGTAACATGGGATGGCCGTTTCTCGGCGAGACTGTCGGCTATCTCCGCCCATACTCCGCCACCACCATCGGAGATTTCATGGAGAATCACATCAAGAGATATGGTAAGGTGTATAAGTCGAACCTGTTCGGAGAGCCGACGGTGGTGTCGGCCGATGCTGGACTGAACCGGTACATACTGCAGAACGAAGGACGGCTGTTTGAATGTAGCTACCCGAAGAGCATCGGCGGGATCCTCGGGAAATGGTCGATGCTGGTTACCGTCGGCGACATGCACCGGGATATGAGAATGATATCGCTGAACTTTCTGAGTCAGAGTAGACTCAAGACTCATCTCTTGAAGGAGGTTGAGAACCAGACGCTGCTCGTCCTCCGTTCTTGGAAAGATTCCTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTCACTTTCAATTTAATGGCAAAACACATCATGAGTTTGGATCCATGGAAGTTGGAGACGGAGATGTTGAAAAAGGAGTATGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATCTGCCAGGAACGCCGTACAGAAAAGCTTTGAAGTCTCGGTCGACAATCTTGAAGTTCATCGAGCAGAAAATGGAGGAACGGAAGTTGAAAATGGAAGCCGACGGCGGAGATTTCGAGGACGATGATCTACTAGGCTGGGCATTGAAGCACTCAAATCTCTCGACGGAGCAAATTCTCGACCTGATTCTGAGCTTGCTGTTCGCCGGCCACGAGACGTCGTCCGTGGCCATAGCTTTAGCCATCTTCTTCCTCTCCGGCAGCCCGGCCACCGTCCAACAGTTGACGGTAAGTCACCGGAAAAGATTTCCGACGCCGATTTCCCCTCTTTCATCCTCCTCTCTGATTTCTCGGAATTCCATACAGGAAGAACACCTGGAGATCGCCAGAGCCAATAAGCGATTGGGGAAGACGGAATTGGATTGGGAAGATTACAAGAAAATGGAATTCACTCAATGTGTGATTACCGAGACGCTTCGGCTTGGGAACGTGGTGAGATTTCTTCACAGAAAGGCACTGAAGGATGTATGGTACAGAGGTTACTTCATTCCACGTGGATGGAAAGTGCTTCCTGTGATTTCTGCAGCGCATTTGGATCCTTTCGTTTTTGACCAACCTCACCACTTTAATCCATGGAGGTGGCAGGAAATGAATGGATCGACATTGGGTAACTCGAGCACGACCGTAACCAATAATTTCATGCCATTTGGCGGAGGACCGAGGCTATGCACTGGTTCAGAACTAGCCAAGCTTGAAATGGCCATTTTTATTCATCATTTGGTCTTGAATTACCAATGGGAGTTGGTGGGTTCAGATCAAGCTTTTGCTTACCCTTTTGTTGACTTCCCTAATGGTCTGCCAATCAGAGTCCGCCACCACACTCTTGTGTAA 1536 49.09 MFHPGLLLCFLPSVLVLSLFVILLRRKRNAVDLPPGNMGWPFLGETVGYLRPYSATTIGDFMENHIKRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPKSIGGILGKWSMLVTVGDMHRDMRMISLNFLSQSRLKTHLLKEVENQTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRKALKSRSTILKFIEQKMEERKLKMEADGGDFEDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPATVQQLTVSHRKRFPTPISPLSSSSLISRNSIQEEHLEIARANKRLGKTELDWEDYKKMEFTQCVITETLRLGNVVRFLHRKALKDVWYRGYFIPRGWKVLPVISAAHLDPFVFDQPHHFNPWRWQEMNGSTLGNSSTTVTNNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELVGSDQAFAYPFVDFPNGLPIRVRHHTLV 511
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 12832582 12837349 - Tan0011309.1 Tan01g1307 738731
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1307 511 Pfam Cytochrome P450 336 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 Pfam Cytochrome P450 34 310 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PANTHER CYTOCHROME P450 26 32 479 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Tan01g1307 511 FunFam Ent-kaurenoic acid oxidase 1 447 510 - -
Tan01g1307 511 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 Gene3D Cytochrome P450 24 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 CDD CYP90-like 65 505 - -
Tan01g1307 511 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1307 511 SUPERFAMILY Cytochrome P450 30 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1307 Tan-Chr1:12832582 Tan01g1309 Tan-Chr1:12832582 3.40E-211 dispersed
Tan01g1307 Tan-Chr1:12832582 Tan01g1308 Tan-Chr1:12832582 5.80E-227 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1307 K09587 - csv:101211854 868.611