Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1310 ATGTTTCATCCAGGGCTTTTACTCTGTTTTCTCCCCTCTGTTTTAGTCCTCTCCCTCTTCGTGATTCTGCTCCGGAGGAAGAGAAATGCCGTTGATCTTCCTCCCGGTAACATGGGATGGCCGTTTCTCGGCGAGACTGTCGGCTATCTCCGCCCATACTCCGCCACCACCATCGGAGATTTCATGGAGAATCACATCAAGAGATATGGTAAGGTGTATAAGTCGAACCTGTTCGGAGAGCCGACGGTGGTGTCGGCCGATGCTGGACTGAACCGGTACATACTGCAGAACGAAGGACGGCTGTTTGAATGTAGCTACCCGAAGAGCATCGGCGGGATCCTCGGGAAATGGTCGATGCTGGTTACCGTCGGCGACATGCACCGGGATATGAGAATGATATCGCTGAACTTTCTGAGTCAGAGTAGACTCAAGACTCATCTCTTGAAGGAGGTTGAGAACCAGACGCTGCTCGTCCTCCGTTCTTGGAAAGATTCCTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTCACTTTCAATTTAATGGCAAAACACATCATGAGTTTGGATCCATGGAAGTTGGAGACGGAGATGTTGAAAAAGGAGTATGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATCTGCCAGGAACGCCGTACAGAAAAGCTTTGAAGTCTCGGTCGACAATCTTGAAGTTCATCGAGCAGAAAATGGAGGAACGGAAGTTGAAAATGGAAGCCGACGGCGGAGATTTCGAGGACGATGATCTACTAGGCTGGGCATTGAAGCACTCAAATCTCTCGACGGAGCAAATTCTCGACCTGATTCTGAGCTTGCTGTTCGCCGGCCACGAGACGTCGTCCGTGGCCATAGCTTTAGCCATCTTCTTCCTCTCCGGCAGCCCGGCCACCGTCCAACAGTTGACGGTAAGTCACCGGAAAAGATTTCCGACGCCGATTTCCCCTCTTTCATCCTCCTCTCTGATTTCTCGGAATTCCATACAGGAAGAACACCTGGAGATCGCCAGAGCCAATAAGCGATTGGGGAAGACGGAATTGGATTGGGAAGATTACAAGAAAATGGAATTCACTCAATGTGTAATTAATCATTCTTAG 1122 49.73 MFHPGLLLCFLPSVLVLSLFVILLRRKRNAVDLPPGNMGWPFLGETVGYLRPYSATTIGDFMENHIKRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPKSIGGILGKWSMLVTVGDMHRDMRMISLNFLSQSRLKTHLLKEVENQTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRKALKSRSTILKFIEQKMEERKLKMEADGGDFEDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPATVQQLTVSHRKRFPTPISPLSSSSLISRNSIQEEHLEIARANKRLGKTELDWEDYKKMEFTQCVINHS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12832582 12837349 - Tan0011309.4 Tan01g1310 738734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1310 373 Gene3D Cytochrome P450 24 373 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1310 373 PANTHER CYTOCHROME P450 26 32 372 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Tan01g1310 373 Pfam Cytochrome P450 34 310 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g1310 373 SUPERFAMILY Cytochrome P450 30 371 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1308 Tan-Chr1:12832582 Tan01g1310 Tan-Chr1:12832582 2.70E-211 dispersed
Tan01g1310 Tan-Chr1:12832582 Tan04g0177 Tan-Chr4:1380257 5.80E-59 dispersed
Tan01g1309 Tan-Chr1:12832582 Tan01g1310 Tan-Chr1:12832582 2.00E-213 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1310 K09587 - csv:101211854 598.201