Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1356 ATGTCGGTTGCCAACGCCGACACATCTCCGACTATGTCGGAGGCCTCGACGGTCGAGGATATGCATGCCCTCGGCGTCGAGAAGAGCAGCAGCAGCCCTGCCGATAGGGCTCAATGGGTGGCGAATCCACCGGTACCACCGGGGCTATGGCGAGAGCTCATCGATTCTCTCCGCGACACCATTTTCCCAGATCCAACCAAGCTTTTGTCCCTCAAGAAGAAGACCGGAATTCCTCTGGTTGCTTCCCTTCTGCAGGCCATCTTCCCTATCCTCTCCTGGGGCCGGAGCTACAATCCCGGCATGTTCAAGAATGACATCTTGGCCGGCTTAACTCTCGCAACCCTCTGCATTCCCCAGAGTATTGGATATGCAAATCTGGCAAAGCTTGAACCTCAATATGGCCTCTATACAAGCATTGTGCCGCCGCTTGTTTATGCAGTGTTGGGAACTTCGAGGGAAATAGCCATCGGTCCGGTGGCCATAGTTTCTTTGCTTTTGCCGGCGATGATCGAGAAGATTCAAGATCCCGCCGCCGACCCTCTTGCTTACAGAAACCTTGTCTTCACCGCCACTTTCTTCGCCGGAATCTTTCAGGCCGCCTTTGGACTCTTTGGGCTGGGATTTTTGGTGGATTTTCTGTCACATGCTGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCATCACTCACTTCACTAACAAAACTGATGTCCTCTCTGTTATGGAAGCTGTGTTTGGATCATTTCATCATCATCCTTGGAATCCCTTGAACTTCATCATTGGCTCCTCATTCTTGTCCTTCATCCTCATCACCAGATTGCTGGGGAAAAAGTACAAGAAACTCTTCTGGTTAGCAGCCGTAGCCCCACTTCTGTCTGTAATTCTATCAACCCTTATAGTGTTCCTGACAAGAGCCGACCACCATGGCGTCAACATCGTCAAACGAGTCCCCGCCGGCCTCAATCCCATCTCCGCTCACCACATCCAAATCCACAGCCCTCACATTCCTCAGATCGCAAAGATCGCCGTCATCGTCGCTGTCGTCGCCCTCACGGAAGCCATTGCAGTAGGAAGATCCTTAGCCTCCATGAAAGGATACAACATTGATGGAAACAGGGAAATGGTTGCCTTAGGCTTCATGAACATCGCTGGATCCCTCACTTCTTGCTATACCGCAACTGGTTCTTTCTCACGATCGGCAGTGAATTATAGCGCGGGATGCGAGACCGCGGTATCGAACATAGTAATGGCAATAACGGTGATGATATCACTGGAGTTGTTCACGAAACTGCTCTATTTCACTCCTAATGCCATTCTCGCTTCCATTATTATGTCTGCACTTCCAGGCCTCATTGATATTCACGAAGCTTACAATATTTGGAAGATCGACAAGCTGGACTTCTTTGCCTGCCTCGGAGCCTTTATCGGTGTCCTCTTTGTATCCGTTGAAATGGGCCTCCTCGTTTCGGTAATGATATCATTTGCTAAGATAATACTAATCTCAATCAAACCTGGGACTGAGATTTTGGGAAAAATCCCTGGAACCGATATATTTTGTGATATTCATCAATATCCAATCGCTCTTAACACGCCTGGAGTTCTCATCATTCGTGTTAAATCTGGCTTGCTTTGCTTTGCCAATGCCAACTTTGTCAAAGATAGGATTCTGAGGTTCATCAGTAGCCAAGAAGATGCATCTCCAAAGAGAACCATTCACTTCCTAATCATTGATCTTTCCAATTTAATGAATATTGACACTTCAGGAATTGCTTCCTTTGAAGAACTGCAGAATAGTTTGGCAGCCAGTGGAGTAGAGTTGGCCATTGCAAATCCAAAATGGCAAGTGATTCACAAGCTAAAGGCAGCAAATTTTGTTGCCAAGCTCAAAGGGAGAGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCATGCCTTTCAGCTAAAATGGGAGCCATTTAA 1992 47.94 MSVANADTSPTMSEASTVEDMHALGVEKSSSSPADRAQWVANPPVPPGLWRELIDSLRDTIFPDPTKLLSLKKKTGIPLVASLLQAIFPILSWGRSYNPGMFKNDILAGLTLATLCIPQSIGYANLAKLEPQYGLYTSIVPPLVYAVLGTSREIAIGPVAIVSLLLPAMIEKIQDPAADPLAYRNLVFTATFFAGIFQAAFGLFGLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDVLSVMEAVFGSFHHHPWNPLNFIIGSSFLSFILITRLLGKKYKKLFWLAAVAPLLSVILSTLIVFLTRADHHGVNIVKRVPAGLNPISAHHIQIHSPHIPQIAKIAVIVAVVALTEAIAVGRSLASMKGYNIDGNREMVALGFMNIAGSLTSCYTATGSFSRSAVNYSAGCETAVSNIVMAITVMISLELFTKLLYFTPNAILASIIMSALPGLIDIHEAYNIWKIDKLDFFACLGAFIGVLFVSVEMGLLVSVMISFAKIILISIKPGTEILGKIPGTDIFCDIHQYPIALNTPGVLIIRVKSGLLCFANANFVKDRILRFISSQEDASPKRTIHFLIIDLSNLMNIDTSGIASFEELQNSLAASGVELAIANPKWQVIHKLKAANFVAKLKGRVFLSVGEAVDACLSAKMGAI 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13232594 13244378 - Tan0000108.1 Tan01g1356 738780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1356 663 ProSiteProfiles STAS domain profile. 552 655 IPR002645 -
Tan01g1356 663 CDD STAS_SulP_like_sulfate_transporter 536 646 - -
Tan01g1356 663 Gene3D STAS domain 515 658 IPR036513 -
Tan01g1356 663 Pfam Sulfate permease family 102 483 IPR011547 GO:0016020(InterPro)
Tan01g1356 663 ProSitePatterns SLC26A transporters signature. 131 152 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan01g1356 663 PANTHER SULFATE TRANSPORTER 79 657 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan01g1356 663 NCBIfam sulfate permease 89 646 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan01g1356 663 FunFam Sulfate transporter 31 515 658 - -
Tan01g1356 663 Pfam STAS domain 537 651 IPR002645 -
Tan01g1356 663 SUPERFAMILY SpoIIaa-like 542 655 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1356 Tan-Chr1:13232594 Tan11g1361 Tan-Chr11:11961373 1.80E-220 dispersed
Tan01g1356 Tan-Chr1:13232594 Tan01g3965 Tan-Chr1:104464418 3.00E-183 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1356 K17469 - csv:101213063 1018.07