Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1385 ATGTTCCCTCTGCTCCTTCTGCTTCTCTTCTTCCACTTCCCATCTGTTTCTCCGGCCAAACTCCGGCCCGATTACTACGCCGAATCATGCCCTCACGCCGAATCCATTGTCCGGACTGTGATGCAGAAAGCTCTGATCAGAGAGCCTCGGAGTGTCGCCTCCGTTATGCGCTTCCAGTTTCACGATTGCTTCGTTAATGGCTGTGATGCTTCTATGTTGCTGGATGATACGCCGACGATGCTCGGAGAGAAACTCTCTCTCTCGAACATTAATTCGCTTAGATCTTACGAAGTCGTTGATGAAGTGAAAGTGGCGCTGGAGAAGGTCTGTCCTGGAATCGTCTCTTGTGCAGATATCATAATTATGGCATCTAGAGACGCCGTTGCTCTGACGGGCGGCCCCAACTGGGCAGTGAGACTGGGCAGGCTGGACAGCTTAACAGCAAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAAGCTCTCTCATTGACCTCTTCAACAAATACAACCTCTCAGTTAAAGATCTTGTTTCTCTTTCGGGTTCGCACTCGATCGGCCAAGGGCGGTGTTTCTCCGTCATGTTTCGGCTCTACAACCAGTCAGGTACCGGGAGGCCGGACCCGGCCATCGAGCCGAGCTTCAGAGAAGAACTCTTCAAGCGATGCCCTCAAGGTGGGGATGAAAATGTCACAGTGAACCTTGACTCTACACCTTATGTTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGATTCTTGAATTCTGATGAAACTCTCTATACATTTGCTGAAACTAGAAGGTATGTGAGGTTCTTTAGCAAAAATCAAAGGGCATTTTTTAGGGCGTTCGTGGAGGGTATGGTGAAGATGGGTGAGTTGCAGTCTGGCCGGCCGGGGGAAGTAAGAAGGAACTGTAGGGTAGTCAATGGACAGTCTGTGATCATATAA 972 49.69 MFPLLLLLLFFHFPSVSPAKLRPDYYAESCPHAESIVRTVMQKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVVDEVKVALEKVCPGIVSCADIIIMASRDAVALTGGPNWAVRLGRLDSLTASQEDSNQIMPSPRANASSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSVMFRLYNQSGTGRPDPAIEPSFREELFKRCPQGGDENVTVNLDSTPYVFDNQYFKDLVGGRGFLNSDETLYTFAETRRYVRFFSKNQRAFFRAFVEGMVKMGELQSGRPGEVRRNCRVVNGQSVII 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13775572 13778895 + Tan0015514.1 Tan01g1385 738809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1385 323 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 SUPERFAMILY Heme-dependent peroxidases 21 317 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Tan01g1385 323 CDD secretory_peroxidase 20 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan01g1385 323 Gene3D - 24 317 - -
Tan01g1385 323 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 FunFam Peroxidase 24 167 - -
Tan01g1385 323 Gene3D Peroxidase, domain 2 158 298 - -
Tan01g1385 323 Pfam Peroxidase 37 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 FunFam Peroxidase 158 298 - -
Tan01g1385 323 PANTHER PEROXIDASE 72-RELATED 12 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g1385 323 ProSiteProfiles Plant heme peroxidase family profile. 20 317 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1385 Tan-Chr1:13775572 Tan03g2030 Tan-Chr3:75315168 1.00E-75 dispersed
Tan01g1385 Tan-Chr1:13775572 Tan01g1261 Tan-Chr1:12218506 1.50E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1385 K00430 - csv:116406089 564.303