Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1393 | ATGGGAAAACTCTATCTTACAGCTCTAATTCTGGCTTGCTTTCATTATTTTGCACTGTCTGATTTTCAAGGTCAGGCACTCATTGAATTAAAGGAAGCATTGAATGCAACAAGTAGTCAGCTCACAAGTTGGAACCCAAATCACGTCAATCCATGCAGCAGTTGGACCAATATTGTGTGTAATGGAAACAATGTGGTTAATATATTCTTGCCAACAATGGGATTTACTGGAACCTTGTCTCCGAGTATTGTTGTTCTAAAATCTCTTTCAACCCTGAACTTGGAGGGAAATTACATAACTGGAGAGATACCGGAGGATTTTGGGAACCTGACAAATTTGGTCAATTTGGACCTGAAAAATAACAGCCTAACCGGTCAAATACCATCGTCCCTGGGTAATCTTAAGAAACTACAGTTCCTAACTCTGAGTCACAATAATCTAACTGGGACCATTCCTGAGTCATTTTCAACCCTTCCCAGCTTGATCAATCTTTTTCTTGATTCAAATGATCTCAGTGGCCAAATTCCGGAGCAGTTATTTCAAGTTTCAAAATTCAACTTCTCTGGAAATAAGTTGGAGTGTGGCAAAAATTCTCGTCGTTCCTGTGCTTCAGACAGTAAAAACTCAGGTGCTTCAAATAAGTCAAAGGTTGGCCTTATAGCTGGACTTATTGCTGGGTTAATAGTTGCTCTTCTTTTGGTCGGATTGTTGTTTTTCTTGTGCAATTGTAGATATAAAGGCTACAAGGGTGAAGACTTTGTAGATGTTCCCGGTAATTGTCATGACTATCATCGAATATTAAAATGGATTATGCAGACATCTCTTGTGAAGGCTAGGTTTCAAGGATATAGTGTCAATGCAAGTGAAATTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTTCATGGAGGGAATTACAACTAGCTACAGAAAACTTCAGTGAGAAAAATGTTATAGGACAAGGAGGCTTTGGAAAGGTTTACAAAGGGGTGCTTACTGATGGCACCAAGGTTGCAGTGAAACAGTCAACTAATTATGAAAGCATTGGGGGAGATGCTGCTTTTCTGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTATTGCGGCTGATTGGGTTCTGTACAACTGAGACTGAACGCTTATTGGTATATCCCTTTATGCAGAACTTGAGTGTTGCCTACCATCTTCGAGAACTTAAGCCTGGGGAACCTATTTTAGATTGGCCTACTCGAAAACGTGTGGCATTGGGCGCAGCTCGTGGTTTAGGATATCTTCATGAACATTGCAATCCAAAGATTATTCACCGAGACGTTAAGGCTGCTAATGTATTGCTTGATGAGGATTTTGAAGCTGTCGTGGGCGATTTTGGCCTAGCAAAGTTGGTTGATATTAGGAAGACTAATGTCACAACTCAAGTTCGGGGGACGGCTGGCCACATAGCACCAGAGTACTTATCCACCGGAAAATCATCAGAAAAGACCGATGTTTTTGGTTATGGCATTATGCTTTTAGAACTTGTTACAGGGCAACGTGCAATGGACTTATCACGCTTGGAAGGAGATGATGTTTTACTGCTCGACCATGTCAAAAAATTGGAACGGGAGAACCGGCTCAATGCCATTGTCGATGAAAACCTGGATGACTATGATATTAGAGAGGTGGAAATGATGACCCAAGTTGCACTACTGTGCACGCAGCCATCTTCGGTCGACCGACCGACAATGTCACAGGTCATTCGGATGCTGGAAGGCGAGGGGCTTGCAGAGAGGTGGGAAGAATGGCAGCATTTAGAGGTGATTCGCAAACAAGACTATGAGAGAATGCAAAGAAGATTTGCATTAGGGGATGATTCCATTTATAAACAGGAACCTATCCAGTTGTCTGGTGGAAGATGA | 1908 | 41.67 | MGKLYLTALILACFHYFALSDFQGQALIELKEALNATSSQLTSWNPNHVNPCSSWTNIVCNGNNVVNIFLPTMGFTGTLSPSIVVLKSLSTLNLEGNYITGEIPEDFGNLTNLVNLDLKNNSLTGQIPSSLGNLKKLQFLTLSHNNLTGTIPESFSTLPSLINLFLDSNDLSGQIPEQLFQVSKFNFSGNKLECGKNSRRSCASDSKNSGASNKSKVGLIAGLIAGLIVALLLVGLLFFLCNCRYKGYKGEDFVDVPGNCHDYHRILKWIMQTSLVKARFQGYSVNASEIDRRIAFGQLKRFSWRELQLATENFSEKNVIGQGGFGKVYKGVLTDGTKVAVKQSTNYESIGGDAAFLREVEMISVAVHRNLLRLIGFCTTETERLLVYPFMQNLSVAYHLRELKPGEPILDWPTRKRVALGAARGLGYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDIRKTNVTTQVRGTAGHIAPEYLSTGKSSEKTDVFGYGIMLLELVTGQRAMDLSRLEGDDVLLLDHVKKLERENRLNAIVDENLDDYDIREVEMMTQVALLCTQPSSVDRPTMSQVIRMLEGEGLAERWEEWQHLEVIRKQDYERMQRRFALGDDSIYKQEPIQLSGGR | 635 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 13839873 | 13848724 | - | Tan0018381.1 | Tan01g1393 | 738817 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1393 | 635 | SMART | LRR_typ_2 | 158 | 182 | IPR003591 | - | |
Tan01g1393 | 635 | SMART | LRR_typ_2 | 86 | 109 | IPR003591 | - | |
Tan01g1393 | 635 | SMART | LRR_typ_2 | 110 | 133 | IPR003591 | - | |
Tan01g1393 | 635 | SMART | LRR_typ_2 | 134 | 157 | IPR003591 | - | |
Tan01g1393 | 635 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 11 | 633 | - | - | |
Tan01g1393 | 635 | Gene3D | Ribonuclease Inhibitor | 20 | 204 | IPR032675 | - | |
Tan01g1393 | 635 | SUPERFAMILY | L domain-like | 23 | 194 | - | - | |
Tan01g1393 | 635 | ProSiteProfiles | Protein kinase domain profile. | 314 | 591 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1393 | 635 | Pfam | Leucine Rich Repeat | 88 | 110 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1393 | 635 | FunFam | Somatic embryogenesis receptor kinase 1 | 283 | 390 | - | - | |
Tan01g1393 | 635 | SMART | serkin_6 | 314 | 586 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1393 | 635 | Pfam | Leucine rich repeat N-terminal domain | 22 | 61 | IPR013210 | - | |
Tan01g1393 | 635 | Pfam | Leucine rich repeat | 112 | 171 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1393 | 635 | Gene3D | Phosphorylase Kinase; domain 1 | 284 | 390 | - | - | |
Tan01g1393 | 635 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 20 | 181 | - | - | |
Tan01g1393 | 635 | ProSitePatterns | Protein kinases ATP-binding region signature. | 320 | 342 | IPR017441 | GO:0005524(InterPro) | |
Tan01g1393 | 635 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 437 | 449 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g1393 | 635 | Gene3D | Transferase(Phosphotransferase) domain 1 | 391 | 606 | - | - | |
Tan01g1393 | 635 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 391 | 606 | - | - | |
Tan01g1393 | 635 | SUPERFAMILY | Protein kinase-like (PK-like) | 294 | 587 | IPR011009 | - | |
Tan01g1393 | 635 | Pfam | Protein tyrosine and serine/threonine kinase | 317 | 586 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1393 | Tan-Chr1:13839873 | Tan01g1395 | Tan-Chr1:13867517 | 2.90E-228 | dispersed | |
Tan01g1393 | Tan-Chr1:13839873 | Tan01g1394 | Tan-Chr1:13839873 | 1.20E-178 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67018 | PF00069 | Pkinase | 8.20E-42 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1393 | - | - | - | 0.0 |