Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1432 | ATGGAGTTCGAGGATCACGAAGAAGAAGACATGGAAATAGAAGCACCAACAAACTACAACAAACCACTTCTCCAAAGCCACCCACTTTCCCGGCTCAACAAAAACCCATCTCCGGTCCACTCGAACCGCCCTCTCCTCCTCTCCAAGCCCTCCTACAACTACAACTATAAAGAGTGCTTAAAAAACCACGCCGTCGCCGTCGGTGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGCCCGCCGGCCCCGACGGCTCTCTCGACGCCCTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGACATTATCCACGCCGCCGCCGCCGCCGACGACGACGACGGAGGAGAATCACCACCGTTTCTGTTGTCCAGCAGACCGAGCTCGCATTTGGTTTCGTACTGGCGTGGTCCGGCTGGGTACCTCCACGTGGCGCCGCAGCGGCGGATGCTGGCACTGCCGTCGCCAGCTTCTTGTGGTGAGGTCGGCGGCGGCGGGAGGAAGCGGGTGCGGACGAAATTCACGGAGGAGCAGAAGGAGAAGATGTTGGTGATGGCGGAAAAGCTGGAGTGGCGGATACAGAAGAACGATGAAGCGGCGGTGATGGAATTTTGCAATGAAATCGGAGTGAAGCGCCGAGTGTTGAAGGTTTGGATGCATAACAACAAAAACACGTTTCGTAAACACGAATCTGAAGATAACAAATTTTCCTAA | 723 | 56.57 | MEFEDHEEEDMEIEAPTNYNKPLLQSHPLSRLNKNPSPVHSNRPLLLSKPSYNYNYKECLKNHAVAVGGHALDGCGEFMPAGPDGSLDALKCAACNCHRNFHRKDIIHAAAAADDDDGGESPPFLLSSRPSSHLVSYWRGPAGYLHVAPQRRMLALPSPASCGEVGGGGRKRVRTKFTEEQKEKMLVMAEKLEWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRKHESEDNKFS | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 14239354 | 14240076 | - | Tan0021604.1 | Tan01g1432 | 738856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1432 | 240 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 41 | 228 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Tan01g1432 | 240 | Pfam | ZF-HD protein dimerisation region | 54 | 106 | IPR006456 | - | |
Tan01g1432 | 240 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 55 | 105 | IPR006456 | - | |
Tan01g1432 | 240 | MobiDBLite | consensus disorder prediction | 19 | 44 | - | - | |
Tan01g1432 | 240 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 56 | 105 | IPR006456 | - | |
Tan01g1432 | 240 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Tan01g1432 | 240 | NCBIfam | homeobox domain, ZF-HD class | 170 | 227 | IPR006455 | - | |
Tan01g1432 | 240 | Gene3D | - | 158 | 230 | - | - | |
Tan01g1432 | 240 | FunFam | Zinc-finger homeodomain protein 2 | 160 | 231 | - | - | |
Tan01g1432 | 240 | SUPERFAMILY | Homeodomain-like | 160 | 232 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1432 | Tan-Chr1:14239354 | Tan02g2444 | Tan-Chr2:93022400 | 9.80E-44 | dispersed | |
Tan01g1432 | Tan-Chr1:14239354 | Tan03g1814 | Tan-Chr3:73750807 | 2.10E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26369 | PF04770 | ZF-HD_dimer | 8.70E-29 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1432 | - | - | - | 0.0 |