Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1453 ATGCCATTTTTAAAATTCCCACCTTCCTCTCTGTTTCTTCTTTTCTCTGTCACCTTCTTCCACTTCTTTGTTCTGGGTCTCTTCTCCAATCACGACTACGATATTCTGATTCAAGTCAAGAACACCCTTCTCGACGACCCCAATGGCGCTTTGAATAATTGGCTTCCTAACGAAGCTCACAACGCCTGTAATTGGACTGGGATCACCTGCGATTCCACTAATTTCTCCGTTGTTTCCATCGATTTGAGTGATTCCGGTGTCGCCGGTGGATTTCCATTCGATTTCTGCCTGATTCCGACCCTCAAAAACCTTTCTCTCTCAAACACCAATATCAATGGAACTTTACTCTCCCCTTCCTTCTCTCTCTGTTCTCACCTTCAACTCCTCAATCTTTCCTCTAACTTGCTTGACGGGAACCTGCCGGACTTTTCCCCTGCCTTCAGTGACCTGCAAATTCTCGATCTCTCCAGCAACAGTTTCATCGGCGACATTCCTCAGAGTTTTGCTCACTTGCAGGCACTGAGAGTGCTTCGTTTGTCGATGAACCTGCTCGACGGGCCGTTCCCTTCTATTCTGGGAAATCTAACTGAGCTAACCGAATTGGCCATCGCTTATAATTCGTTCAAGCCGAGTCCATTACCGTCGGAAATCGGAAACCTGACGAAACTCGTAAATATATTTTTACCCTCCTCGAATCTCACCGGACCCATTCCTGATTCCATCGGAAAACTTCATCTGCTTACGAATCTCGATTTATCAACCAATTCGATTTCGGGCCCGATCCCGGATTCAATCGGCGGACTGAGGAGCATAAAATATATTCAACTCTTTAAAAATCGAATCTCCGGTGTGTTGCCGGGGAGCATCGGTAATTTGACTACTCTGTTATTTCTCGATATCTCGCAGAATAGTCTCACTGGAAAATTTCCGGAAACAATTGCGGCGCTTCGTCTTAAATCTCTAAATCTCAATGACAATTTCCTCGAAGGGGAGGTTCCGGAGAGTTTAGCTTCTAACCCAAATCTTTTCAATTTGAAACTGTTCAACAATAGCTTTTCCGGTGAACTTCCCGCAACTTTGGGTCGGAACTCTGATCTCATTGAGATTGATGTCTCTTCCAACCATTTCGAAGGTGAAATTCCGAAATTCCTCTGCCACGGAAACAAACTTCAGAGAATCGTTTTATTCAGCAACGGTTTCTCTGGAAATTTACCAGAATCGTACGGTCGTTGCGATTCTCTGAATTATGTCAGAATCGAGAACAATCAACTTTCCGGCGAGGTACCGGACTCGTTCTGGAAACTCTCTCAGCTTACTAGCATTCGGATGTCAGATAATCGATTTCAGGGCTCCATTCCGCCGGCGATAATCGGCGCTCGCGATCTCGAAGTGTTGTTGATTTCTGGTAACAACTTCTCCGGCCAGTTGCCGGCGGAGATTTGCAAACTGAAAGAGCTCGTCCGGTTTGACGTCAGCAGGAACAAATTCTCCGGCGGAGTTCCGTCCTGTATAATAGAGTTGCAGAAACTCCAAAAGCTCGACATGCAAGAAAACATGTTCGCCGGAGAAATTCCCAAATTGGTTCAGTCCTGGAAAGAATTAACCGAGTTGAATCTGTCTCATAATCAATTTACCGGGCAGATTCCGCCTCAGCTTGGTGATTTACCGGTTCTAACGTACTTGGATCTTTCTGCTAATTTACTTTCCGGCGAAATCCCCGAGGAATTGACGAAGCTGAAACCGGACCAATTCAATTTATCCAACAACAAATTGACCGGAAGAGTTCCGTCGGGCTTCGAAAACGAACTGTTCGTCGGTAGTTTAATGGGTAACCCGGGTCTCTGTAGCCCGGATTTGAAGCCACTGAACCGGTGCCCGAAACCGAAACCCACAAGTTTCTATGTTGTCGTTGTTCTCTCAGTTCTAGTTTTCGTTCTCATCGGATCTCTCATTTGGGTTATCAAATTCAAGATGAATCTCTTCGGCAAATCGAAATCTCCATGGACGGTGACCAAGTTCCAACGGGTCGGGTTCGACGAAGAAGATGTAATTCCTCATCTAACCAAGGCGAATGTAATCGGGTCGGGCGGTTCGGGTACAGTGTTCAAGGTGGACCTGAAAACGGGTCAGAGCGTCGCCGTCAAAAGTCTCTGGGGAGGACACAACCAATTGGATGCTGAATCAGTTTTCCAGTCGGAAGTTGAGACATTGGGTCGGATCCGCCATGCCAATATTGTGAAGTTACTGTTCAGTTGCAGTAATGGCGAAGGAAGTAGAATTCTTGTGTACGAGTACATGGAGAATGGGAGCTTGGGAGATGTTTTGCACGAGCACAAATTGGAAGCTTTGTCTGATTGGTCGAAAAGATTCGACATCGCCATGGGAGCAGCTCAGGGATTAGCTTATCTACACCACGACTGCGTCCCTCCGATAATCCATCGCGATGTGAAGAGCAACAACATTCTCTTGGATGGAGAATTTCGCCCTCGAGTGGCTGATTTTGGTTTGGCGAAGACGCTGCAGCGTCAAGGGGAGGCTAATGATGATGGTGTCATGTCTCGCATCGCTGGTTCCTACGGCTACATCGCTCCTGAGTATGGATATACTATGAAGGTGACAGAAAAGAGCGACGTGTATAGTTTTGGAGTAGTGTTAATGGAGCTGGTGACGGGAAAGCGACCGAACGATCTGTGCTTCGGAGAGAATAGAGATATCGTAAAATGGGTAACCGCTACTTTGTTAGAAGGAGAAGAAGAGAAAGGGTTGAGTTTAGATGAGATCATTGATGAAAAGTTAGATCCAAGAACATGTGAAGTAGAAGAGATAGTGAAGATTTTGGATGTGGCAGTGCTTTGTACCTCTGCTTTGCCCATTGACAGACCTTCCATGAGAAGAGTAGTTGAGTTGATAAGGGACACCAAACTGGCTCCTCCCAAGTCATAA 2943 46.18 MPFLKFPPSSLFLLFSVTFFHFFVLGLFSNHDYDILIQVKNTLLDDPNGALNNWLPNEAHNACNWTGITCDSTNFSVVSIDLSDSGVAGGFPFDFCLIPTLKNLSLSNTNINGTLLSPSFSLCSHLQLLNLSSNLLDGNLPDFSPAFSDLQILDLSSNSFIGDIPQSFAHLQALRVLRLSMNLLDGPFPSILGNLTELTELAIAYNSFKPSPLPSEIGNLTKLVNIFLPSSNLTGPIPDSIGKLHLLTNLDLSTNSISGPIPDSIGGLRSIKYIQLFKNRISGVLPGSIGNLTTLLFLDISQNSLTGKFPETIAALRLKSLNLNDNFLEGEVPESLASNPNLFNLKLFNNSFSGELPATLGRNSDLIEIDVSSNHFEGEIPKFLCHGNKLQRIVLFSNGFSGNLPESYGRCDSLNYVRIENNQLSGEVPDSFWKLSQLTSIRMSDNRFQGSIPPAIIGARDLEVLLISGNNFSGQLPAEICKLKELVRFDVSRNKFSGGVPSCIIELQKLQKLDMQENMFAGEIPKLVQSWKELTELNLSHNQFTGQIPPQLGDLPVLTYLDLSANLLSGEIPEELTKLKPDQFNLSNNKLTGRVPSGFENELFVGSLMGNPGLCSPDLKPLNRCPKPKPTSFYVVVVLSVLVFVLIGSLIWVIKFKMNLFGKSKSPWTVTKFQRVGFDEEDVIPHLTKANVIGSGGSGTVFKVDLKTGQSVAVKSLWGGHNQLDAESVFQSEVETLGRIRHANIVKLLFSCSNGEGSRILVYEYMENGSLGDVLHEHKLEALSDWSKRFDIAMGAAQGLAYLHHDCVPPIIHRDVKSNNILLDGEFRPRVADFGLAKTLQRQGEANDDGVMSRIAGSYGYIAPEYGYTMKVTEKSDVYSFGVVLMELVTGKRPNDLCFGENRDIVKWVTATLLEGEEEKGLSLDEIIDEKLDPRTCEVEEIVKILDVAVLCTSALPIDRPSMRRVVELIRDTKLAPPKS 980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14636184 14639908 - Tan0008563.1 Tan01g1453 738877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1453 980 FunFam Leucine-rich repeat receptor protein kinase EMS1 116 212 - -
Tan01g1453 980 FunFam Leucine-rich receptor-like protein kinase family protein 213 311 - -
Tan01g1453 980 SMART serkin_6 687 976 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1453 980 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 766 979 - -
Tan01g1453 980 FunFam Receptor-like protein kinase HSL1 317 622 - -
Tan01g1453 980 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524(InterPro)
Tan01g1453 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 26 970 IPR050647 -
Tan01g1453 980 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Tan01g1453 980 Gene3D Phosphorylase Kinase; domain 1 665 765 - -
Tan01g1453 980 Gene3D Transferase(Phosphotransferase) domain 1 766 976 - -
Tan01g1453 980 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Tan01g1453 980 SUPERFAMILY Protein kinase-like (PK-like) 680 969 IPR011009 -
Tan01g1453 980 Pfam Protein kinase domain 689 895 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1453 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1453 980 SUPERFAMILY RNI-like 285 599 - -
Tan01g1453 980 ProSiteProfiles Protein kinase domain profile. 687 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1453 980 Gene3D Ribonuclease Inhibitor 298 627 IPR032675 -
Tan01g1453 980 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 Pfam Leucine Rich Repeat 317 338 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 Pfam Leucine Rich Repeat 534 555 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 Pfam Leucine Rich Repeat 247 268 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 Pfam Leucine Rich Repeat 558 579 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 Pfam Leucine Rich Repeat 413 435 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 Pfam Leucine Rich Repeat 462 483 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 Pfam Leucine Rich Repeat 295 315 IPR001611 GO:0005515(InterPro)
Tan01g1453 980 SUPERFAMILY RNI-like 79 377 - -
Tan01g1453 980 Gene3D Ribonuclease Inhibitor 188 288 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1453 Tan-Chr1:14636184 Tan03g2516 Tan-Chr3:78512855 5.00E-94 dispersed
Tan01g1453 Tan-Chr1:14636184 Tan01g1454 Tan-Chr1:14699629 8.80E-75 tandem
Tan02g2541 Tan-Chr2:93939053 Tan01g1453 Tan-Chr1:14636184 1.10E-83 transposed
Tan09g0381 Tan-Chr9:35389756 Tan01g1453 Tan-Chr1:14636184 5.50E-14 transposed
Tan01g1453 Tan-Chr1:14636184 Tan03g1727 Tan-Chr3:73183948 1.00E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67022 PF00069 Pkinase 2.00E-42 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1453 - - - 0.0