Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1454 | ATGCAGCTTCTTCTTCTCCTCTTTCTCCTTCTTCACCTCCATATCCATCCCTCCATTTCTTCTCACTTGCCTGAATATCGCGCTCTTCTCTCTTTCAAGAGCTCTGTTTCCGATGATTCCCAATCCCCGCTCTCCACTTGGGATGCTGCCACCGCCCACTGTACATGGATCGGTGTCACCTGCGATTTCCGCCGCCACGTCGTCGGCCTCGACCTCTCCGGGATGAATCTCTCTGGTACTCTTTCTCCTGACCTGGGCAGTCTCCGATTTCTCGCTAATCTCTCCGTCGCGGCTAATGAGATTTCCGGTCCGATTCCGCCGGAGATCTCTGCGATCTCTACGCTTAAATACCTTAACCTCTCTAACAATCTGATCAATGGCACATTCCCCTTGGAACTTTCCTTGCTGAAAAGTCTGGAGGTTCTTGATTTGTATAACAACAATATGTCCGGGAACTTGCCGCTTGCGGTCGTCGAGTTGCCGAACCTCCGTCATTTGCATCTCGGCGGGAACTTCTTCTCCGGCGTGATTCCGCCGGAGTACGGACGGTGGCAGTTTATGGAGTACTTGGCGGTGTCTGGAAATGAGCTTCAAGGTCCGGTTCCGCCGGAGATTGGTAATCTGACGAAGCTTCGTGAACTGTATATTGGGTATTACAATACCTACGATGGCGGCATGCCGCCGGAGATCGGAAACTTATCGGAACTCGTTCGATTGGATGCTGCGAACTGTGGGTTAACGGGTGAGATTCCTCGCGAATTTGGAAAACTTCAGAAACTGGACACTCTGTTTCTTCAGGTGAACGGGTTTTCTGGGCCTTTGATTCCGGAGCTTGGGAGCTTAAAGGGATTGAAATCCATGGATTTGTCTAACAACATTCTTGTTGGTGAGATTCCGGACTCATTCTCTCAACTGAAGAACTTGACGCTTTTGCATCTTTTCAGGAATAAGCTTCATGGAGCTATTCCACAGTTCATCGGTGAGTTGCCGGAGCTGGAAGTGTTGCAGTTGTGGGAAAATAACTTCACTGGTTCCATTCCTTATAGTTTGGGTAAGAATGGGAAGCTTGTCGTTCTCGACATTTCATCGAACAAATTGACCGGAACTTTACCTCCTGACATGTGCTATGGAAATCGACTTCAAACTCTGATCACACTCGGCAATTTCTTGTTCGGTTCAATCCCTGAATCTCTCGGTAAATGCGAATCGTTGAGCCGTATTCGAATGGGGGAGAATTTTCTCAATGGTTCGATCCCAAAGGGTCTCTTCGGTTTGCCAAATTTGTCCCAAGTTGAGTTGCAGAACAATTTTCTCACCGGAGAATTTCCAGTCACTGATACCGTCCCTGCAAATCTCGGCCAAATTAGCCTCTCAAATAATCGGCTCTCGGGGTCACTACCTCCGGTGGTCGGAAATTTCTCCGGCGTCCAGAAGCTTCTCCTCGATGGGAACAAATTCTCCGGCCAAATTCCACCTGAAATCGGGCGGTTACAGCAGCTCTCAAAGATCGATTTCAGCCACAACAAATTCTCCGGCCCAATAGCGCCGGAAATCAGCCAATGTAAACTCCTAACCTTCGTCGATCTCAGTCGCAACGAGCTCTCCGGTGAGATTCCGAACGAAATCACCACAATGAGGATATTGAACTATCTGAATCTCTCGAGAAACCATTTAATCGGAAGCGTTCCTACTTCAATATCCTCAATGCAGAGCTTAACATCTGTTGATTTTTCATATAACAATCTCTCCGGTTTGGTTCCGGGCACCGGCCAGTTCAGCTACTTCAACTACACCTCATTTCTAGGCAATCCAGATCTCTGCGGCCCTTACTTGGGACCTTGCAAAGATGGGGTCGGCAATGGCACTCAACAGCCCCATTTAAAAGGCTCACTCTCTGCTTCTGTGAAGCTTCTGCTTGTCATTGTCTTGCTTGTATGCTCGATCGCATTTGCCATTGCGGCGATCATCAAGGCTCGGTCACTCAAACGAGCAAGCGACTCCCGAGCTTGGAAATTAACCGCATTCCAAAGGTTAGATTTCACAGTAGATGACATTTTGGATTGCTTGAAAGAGGACAACATTATTGGGAAAGGAGGCGCTGGGATTGTTTACAAAGGTTTTATGCCGGGCGGCGAAAACGTTGCCGTGAAAAGGCTACCGGCGATGGGTCGAGGGTCGTCCCACGACCATGGATTCAATGCTGAGATACAGACTTTGGGGAGGATTAAACATCGTCACATTGTTAGATTATTGGGATTCTGTTCTAACCATGAAACTAATCTTCTGGTTTATGAGTATATGCCCAATGGAAGTTTAGGGGAAGTTCTGCACGGGAAGAAAGGTGGGCATTTGCAGTGGGACACAAGGTATAAGATCGCCATTGAAGCTGCCAAAGGTCTTTGCTATTTGCATCATGACTGTTCGCCATTGATTGTTCATCGAGATGTGAAATCAAACAATATTCTTCTGGATTCTGATTATGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTTCAAGATTCGGGCACATCAGAGTGTATGTCCGCCATAGCTGGTTCTTACGGATACATAGCTCCAGAATACGCTTATACATTGAGGGTCGACGAAAAGAGTGACGTTTACAGCTTTGGAGTAGTACTCTTGGAGCTTGTTAGTGGGCGAAAGCCAGTCGGAGAATTCGGCGACGGGGTCGACATAGTTCAATGGGTCAGAAAAATGACCAGCCCCAACAATGAAGGGGTAGTAAAAATCATCGATCCAAGGCTCCCCTCTGTCCCACTCAACGAAGTAACTCATGTATTCTACGTAGCAATGCTATGCGTAGAAGACCAAGCCGTAGAGAGGCCAACCATGAGAGAAGTGGTTCAAATCCTTACAGAAGTTCCAAAGCCACCAACTTCAAAACAAGTAGACTTGAAAGAAGCCGACCCAACAGCTCTGCCGCGATTGCCATCGTCTCCGCCACCGCCATCAGGCACGGGGGCATTAGATTCACCAAACAAAAGACAGCCACCACCAGATCTTCTCAGCATTTGA | 3042 | 47.9 | MQLLLLLFLLLHLHIHPSISSHLPEYRALLSFKSSVSDDSQSPLSTWDAATAHCTWIGVTCDFRRHVVGLDLSGMNLSGTLSPDLGSLRFLANLSVAANEISGPIPPEISAISTLKYLNLSNNLINGTFPLELSLLKSLEVLDLYNNNMSGNLPLAVVELPNLRHLHLGGNFFSGVIPPEYGRWQFMEYLAVSGNELQGPVPPEIGNLTKLRELYIGYYNTYDGGMPPEIGNLSELVRLDAANCGLTGEIPREFGKLQKLDTLFLQVNGFSGPLIPELGSLKGLKSMDLSNNILVGEIPDSFSQLKNLTLLHLFRNKLHGAIPQFIGELPELEVLQLWENNFTGSIPYSLGKNGKLVVLDISSNKLTGTLPPDMCYGNRLQTLITLGNFLFGSIPESLGKCESLSRIRMGENFLNGSIPKGLFGLPNLSQVELQNNFLTGEFPVTDTVPANLGQISLSNNRLSGSLPPVVGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPNEITTMRILNYLNLSRNHLIGSVPTSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVGNGTQQPHLKGSLSASVKLLLVIVLLVCSIAFAIAAIIKARSLKRASDSRAWKLTAFQRLDFTVDDILDCLKEDNIIGKGGAGIVYKGFMPGGENVAVKRLPAMGRGSSHDHGFNAEIQTLGRIKHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSDYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTSPNNEGVVKIIDPRLPSVPLNEVTHVFYVAMLCVEDQAVERPTMREVVQILTEVPKPPTSKQVDLKEADPTALPRLPSSPPPPSGTGALDSPNKRQPPPDLLSI | 1013 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 14699629 | 14703544 | - | Tan0016584.1 | Tan01g1454 | 738878 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1454 | 1013 | Pfam | Leucine rich repeat N-terminal domain | 24 | 62 | IPR013210 | - | |
Tan01g1454 | 1013 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 333 | 618 | - | - | |
Tan01g1454 | 1013 | ProSiteProfiles | Protein kinase domain profile. | 689 | 963 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1454 | 1013 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 9 | 963 | IPR050647 | - | |
Tan01g1454 | 1013 | Pfam | Protein tyrosine and serine/threonine kinase | 691 | 960 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g1454 | 1013 | MobiDBLite | consensus disorder prediction | 965 | 1013 | - | - | |
Tan01g1454 | 1013 | SUPERFAMILY | RNI-like | 69 | 412 | - | - | |
Tan01g1454 | 1013 | Gene3D | Ribonuclease Inhibitor | 506 | 614 | IPR032675 | - | |
Tan01g1454 | 1013 | Gene3D | Ribonuclease Inhibitor | 219 | 376 | IPR032675 | - | |
Tan01g1454 | 1013 | Gene3D | Ribonuclease Inhibitor | 380 | 505 | IPR032675 | - | |
Tan01g1454 | 1013 | Gene3D | Ribonuclease Inhibitor | 22 | 218 | IPR032675 | - | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 451 | 472 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 162 | 182 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 236 | 257 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 115 | 134 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 284 | 305 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 332 | 352 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 138 | 156 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 548 | 569 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 500 | 521 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 477 | 497 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 355 | 375 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | Pfam | Leucine Rich Repeat | 524 | 544 | IPR001611 | GO:0005515(InterPro) | |
Tan01g1454 | 1013 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 82 | 325 | - | - | |
Tan01g1454 | 1013 | Gene3D | Transferase(Phosphotransferase) domain 1 | 767 | 979 | - | - | |
Tan01g1454 | 1013 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 811 | 823 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g1454 | 1013 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 658 | 766 | - | - | |
Tan01g1454 | 1013 | Gene3D | Phosphorylase Kinase; domain 1 | 654 | 766 | - | - | |
Tan01g1454 | 1013 | SMART | serkin_6 | 689 | 959 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g1454 | 1013 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 767 | 977 | - | - | |
Tan01g1454 | 1013 | SUPERFAMILY | Protein kinase-like (PK-like) | 682 | 960 | IPR011009 | - | |
Tan01g1454 | 1013 | SUPERFAMILY | L domain-like | 355 | 614 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1454 | Tan-Chr1:14699629 | Tan01g1456 | Tan-Chr1:14699908 | 9.90E-263 | dispersed | |
Tan01g1453 | Tan-Chr1:14636184 | Tan01g1454 | Tan-Chr1:14699629 | 8.80E-75 | tandem | |
Tan01g1454 | Tan-Chr1:14699629 | Tan01g1455 | Tan-Chr1:14699629 | 6.60E-174 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67023 | PF07714 | PK_Tyr_Ser-Thr | 1.60E-45 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1454 | - | - | - | 0.0 |