Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1455 ATGCAGCTTCTTCTTCTCCTCTTTCTCCTTCTTCACCTCCATATCCATCCCTCCATTTCTTCTCACTTGCCTGAATATCGCGCTCTTCTCTCTTTCAAGAGCTCTGTTTCCGATGATTCCCAATCCCCGCTCTCCACTTGGGATGCTGCCACCGCCCACTGTACATGGATCGGTGTCACCTGCGATTTCCGCCGCCACGTCGTCGGCCTCGACCTCTCCGGGATGAATCTCTCTGGTACTCTTTCTCCTGACCTGGGCAGTCTCCGATTTCTCGCTAATCTCTCCGTCGCGGCTAATGAGATTTCCGGTCCGATTCCGCCGGAGATCTCTGCGATCTCTACGCTTAAATACCTTAACCTCTCTAACAATCTGATCAATGGCACATTCCCCTTGGAACTTTCCTTGCTGAAAAGTCTGGAGGTTCTTGATTTGTATAACAACAATATGTCCGGGAACTTGCCGCTTGCGGTCGTCGAGTTGCCGAACCTCCGTCATTTGCATCTCGGCGGGAACTTCTTCTCCGGCGTGATTCCGCCGGAGTACGGACGGTGGCAGTTTATGGAGTACTTGGCGGTGTCTGGAAATGAGCTTCAAGGTCCGGTTCCGCCGGAGATTGGTAATCTGACGAAGCTTCGTGAACTGTATATTGGGTATTACAATACCTACGATGGCGGCATGCCGCCGGAGATCGGAAACTTATCGGAACTCGTTCGATTGGATGCTGCGAACTGTGGGTTAACGGGTGAGATTCCTCGCGAATTTGGAAAACTTCAGAAACTGGACACTCTGTTTCTTCAGGTGAACGGGTTTTCTGGGCCTTTGATTCCGGAGCTTGGGAGCTTAAAGGGATTGAAATCCATGGATTTGTCTAACAACATTCTTGTTGGTGAGATTCCGGACTCATTCTCTCAACTGAAGAACTTGACGCTTTTGCATCTTTTCAGGAATAAGCTTCATGGAGCTATTCCACAGTTCATCGGTGAGTTGCCGGAGCTGGAAGTGTTGCAGTTGTGGGAAAATAACTTCACTGGTTCCATTCCTTATAGTTTGGGTAAGAATGGGAAGCTTGTCGTTCTCGACATTTCATCGAACAAATTGACCGGAACTTTACCTCCTGACATGTGCTATGGAAATCGACTTCAAACTCTGATCACACTCGGCAATTTCTTGTTCGGTTCAATCCCTGAATCTCTCGGTAAATGCGAATCGTTGAGCCGTATTCGAATGGGGGAGAATTTTCTCAATGGTTCGATCCCAAAGGGTCTCTTCGGTTTGCCAAATTTGTCCCAAGTTGAGTTGCAGAACAATTTTCTCACCGGAGAATTTCCAGTCACTGATACCGTCCCTGCAAATCTCGGCCAAATTAGCCTCTCAAATAATCGGCTCTCGGGGTCACTACCTCCGGTGGTCGGAAATTTCTCCGGCGTCCAGAAGCTTCTCCTCGATGGGAACAAATTCTCCGGCCAAATTCCACCTGAAATCGGGCGGTTACAGCAGCTCTCAAAGATCGATTTCAGCCACAACAAATTCTCCGGCCCAATAGCGCCGGAAATCAGCCAATGTAAACTCCTAACCTTCGTCGATCTCAGTCGCAACGAGCTCTCCGGTGAGATTCCGAACGAAATCACCACAATGAGGATATTGAACTATCTGAATCTCTCGAGAAACCATTTAATCGGAAGCGTTCCTACTTCAATATCCTCAATGCAGAGCTTAACATCTGTTGATTTTTCATATAACAATCTCTCCGGTTTGGTTCCGGGCACCGGCCAGTTCAGCTACTTCAACTACACCTCATTTCTAGGCAATCCAGATCTCTGCGGCCCTTACTTGGGACCTTGCAAAGATGGGGTCGGCAATGGCACTCAACAGCCCCATTTAAAAGGCTCACTCTCTGCTTCTGTGAAGCTTCTGCTTGTCATTGTCTTGCTTGTATGCTCGATCGCATTTGCCATTGCGGCGATCATCAAGGCTCGGTCACTCAAACGAGCAAGCGACTCCCGAGCTTGGAAATTAACCGCATTCCAAAGGTTAGATTTCACAGTAGATGACATTTTGGATTGCTTGAAAGAGGACAACATTATTGGGAAAGGAGGCGCTGGGATTGTTTACAAAGGTTTTATGCCGGGCGGCGAAAACGTTGCCGTGAAAAGGCTACCGGCGATGGGTCGAGGGTCGTCCCACGACCATGGATTCAATGCTGAGATACAGACTTTGGGGAGGATTAAACATCGTCACATTGTTAGATTATTGGGATTCTGTTCTAACCATGAAACTAATCTTCTGGTTTATGAGTATATGCCCAATGGAAGTTTAGGGGAAGTTCTGCACGGGAAGAAAGGTGGGCATTTGCAGTGGGACACAAGGTATAAGATCGCCATTGAAGCTGCCAAAGGTCTTTGCTATTTGCATCATGACTGTTCGCCATTGATTGTTCATCGAGATGTGAAATCAAACAATATTCTTCTGGATTCTGATTATGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTTCAAGATTCGGGCACATCAGAGTGTATGTCCGCCATAGCTGGTTCTTACGGATACATAGCTCCAGGTATCGATTTGAAGTCTTAA 2604 47.62 MQLLLLLFLLLHLHIHPSISSHLPEYRALLSFKSSVSDDSQSPLSTWDAATAHCTWIGVTCDFRRHVVGLDLSGMNLSGTLSPDLGSLRFLANLSVAANEISGPIPPEISAISTLKYLNLSNNLINGTFPLELSLLKSLEVLDLYNNNMSGNLPLAVVELPNLRHLHLGGNFFSGVIPPEYGRWQFMEYLAVSGNELQGPVPPEIGNLTKLRELYIGYYNTYDGGMPPEIGNLSELVRLDAANCGLTGEIPREFGKLQKLDTLFLQVNGFSGPLIPELGSLKGLKSMDLSNNILVGEIPDSFSQLKNLTLLHLFRNKLHGAIPQFIGELPELEVLQLWENNFTGSIPYSLGKNGKLVVLDISSNKLTGTLPPDMCYGNRLQTLITLGNFLFGSIPESLGKCESLSRIRMGENFLNGSIPKGLFGLPNLSQVELQNNFLTGEFPVTDTVPANLGQISLSNNRLSGSLPPVVGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPNEITTMRILNYLNLSRNHLIGSVPTSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVGNGTQQPHLKGSLSASVKLLLVIVLLVCSIAFAIAAIIKARSLKRASDSRAWKLTAFQRLDFTVDDILDCLKEDNIIGKGGAGIVYKGFMPGGENVAVKRLPAMGRGSSHDHGFNAEIQTLGRIKHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSDYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPGIDLKS 867
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14699629 14703544 - Tan0016584.3 Tan01g1455 738879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1455 867 Gene3D Transferase(Phosphotransferase) domain 1 767 866 - -
Tan01g1455 867 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 766 - -
Tan01g1455 867 ProSiteProfiles Protein kinase domain profile. 689 867 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1455 867 SUPERFAMILY Protein kinase-like (PK-like) 682 861 IPR011009 -
Tan01g1455 867 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Tan01g1455 867 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Tan01g1455 867 Gene3D Ribonuclease Inhibitor 505 614 IPR032675 -
Tan01g1455 867 Pfam Protein kinase domain 691 861 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1455 867 FunFam Protein kinase superfamily protein 767 839 - -
Tan01g1455 867 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Tan01g1455 867 SMART serkin_6 689 867 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1455 867 Gene3D Ribonuclease Inhibitor 135 220 IPR032675 -
Tan01g1455 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1455 867 SUPERFAMILY RNI-like 69 415 - -
Tan01g1455 867 Gene3D Ribonuclease Inhibitor 221 376 IPR032675 -
Tan01g1455 867 Gene3D Ribonuclease Inhibitor 380 504 IPR032675 -
Tan01g1455 867 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Tan01g1455 867 SUPERFAMILY L domain-like 355 614 - -
Tan01g1455 867 Pfam Leucine Rich Repeat 548 569 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 332 352 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 524 544 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 162 182 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 284 305 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 115 134 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 138 156 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 477 497 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 500 521 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 236 257 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 451 472 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 Pfam Leucine Rich Repeat 355 375 IPR001611 GO:0005515(InterPro)
Tan01g1455 867 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 863 IPR050647 -
Tan01g1455 867 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1455 Tan-Chr1:14699629 Tan03g1728 Tan-Chr3:73213135 1.40E-23 dispersed
Tan01g1454 Tan-Chr1:14699629 Tan01g1455 Tan-Chr1:14699629 6.60E-174 tandem
Tan01g1455 Tan-Chr1:14699629 Tan01g1456 Tan-Chr1:14699908 7.30E-174 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67024 PF00069 Pkinase 1.60E-34 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1455 - - - 0.0