Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1459 ATGGCATCTTGTGATCTCTTCTTCATATTCTTTCTTCTTCTTTCTCCTCAAGTTCATTCCATTTCTTTCCAAATCAATAACTTCGATTCTAATTCTTCCAACATGGTTTATCATGGAGATGCAAAGCCTTTAAATGGTTCCATTAGCTTCAATAAAGGTCAACTTGGTTGGGCCACTTACGCCCAAAAGCTGCTTCTTTGTGATCATTCCAATGGCCACCTCTCAAATTTCAAAACCCACTTCTCATTTCTCATAAAAAACAATAATCAAACAAACTCCAATACTCATAGCCATGGATTAACTTTTTTTCTTGCTCCTTCTGAATTCAACCCACCACTTAATTCTTCTGGATCTTTTCTGGGTCTGTTTAATTCCACACAAAATCAACCCTTTCAAAACCAAATCGTTCATGTGGAATTTGACACTTTTCCAAACCCTGAATGGGATCCCCCATTTCAACACATGGGCATAAACAAAAACTCAATTGCTTCCTCAATTTATTCTCCATGGAATTCAACTGATCATTATCAGAAGAGGACCCACGTGTGGATTTCTTACAATGCAACAACTAAAAATCTGAGTGTCTCATTGAATAACAATATGACAACTATTTCTCATGAAATCGATCTGATGGAGATTCTTCCTGAAAAAGTGACAATTGGGTTTTCAGCTTCGGTTGAGAATCTCAGCATTGAGTTATGGGAATTCAGTTCGGGTAATTTTGATGCAATCAATGAAGAGAAAGATGACCATTTCAATATGGATGAAAGTGAAAAGGCCATAAACATGAAATTATTAGCGGTTCTAATTGCTTGGGTGGGTGTTTTTGTGATAGCGATTGTTTCAATTTTTGTAGTTTCTTTGGCAAGATCTGGCCGAGAGAAGAAAAAAGATCAGGAACATGGAGTGATGAAATTGGCTTCAATTTATTCCGATTTGAACAAAGAAGCTTCACCACCAAGAAGATTCTCTTACAGATATCTTGCTATGGCGACGGACAACTTTTCAATGAATGGAAAATTGGGACAAGGAGGATTTGGAGCGGTGTTTAAAGGCCATTTGCCTGGTGCTAATAAGACAGTTGCTGTGAAGAAGATTTTCAAAGGCTCAACGCAGGGAAAGAGAGAGTATGTGAGTGAAGTGAAGATTATTAGCCGTATGAGGCACAAGAATTTGGTGCAACTTATAGGATGGTGCCATGAGAAGGATACTAGTGAGTTTCTTCTCGTCTATGAGTTCATGCCCAATGGTAGCCTCGACTCTCATCTCTTTCGAAAATGCCCTCCTTTATCGTGGCCACTCAGGTACAAAATATCCTTGGGACTAGCCTCTGCACTACTCTATCTCCATGAAGAATGGGAGCATAGTGTCATCCACAGAGATATCAAATCAAGCAACGTGCTTCTAGATTCCAATTTCACAGCAAAACTCGGCGACTTCGGATTAGCGAGGTTGGCAAAGCACGAACTCAACTCGAAAACACCCGGGTTGGTGGGAACGTTTGGCTACATGGCTCCCGAGTATATAAGCAGCGGTCGGGCAAGCAAAGAGTCAGACATATTCAGCTATGGAGTGGTTTTACTTGAGATTGTAAGTGGAAGAAAGTGTTGCGATCATTCAGGGAAGGGGTTGGTAGAATTGGTTTGGGATGCTTATGGAAGAGGAGAGATTATTGAAGCAATATTGGATGAAAAACTGCGAGAGGGCTTTGTGGAGGCAAGACAAGTAGAGCGTTTGAGCGTGGTTGGGCTGTGGTGTGCTCATCCTGATGCCACTCAAAGGCCATCCATTAACCAAGTGATTCAAGTTCTTAGTTTTGAAGAGGCAATGCCTAATTTACCACAAAAAATGCCTCTTCCAACTTTTAATCATGCTTCCCTTAAGTTTTATAATCTCAACTTTTCTTGTCCTCACACAAACTTGGGCTTGACTTGTACTTTTAAGCCTTTAGGAATATAG 1959 40.28 MASCDLFFIFFLLLSPQVHSISFQINNFDSNSSNMVYHGDAKPLNGSISFNKGQLGWATYAQKLLLCDHSNGHLSNFKTHFSFLIKNNNQTNSNTHSHGLTFFLAPSEFNPPLNSSGSFLGLFNSTQNQPFQNQIVHVEFDTFPNPEWDPPFQHMGINKNSIASSIYSPWNSTDHYQKRTHVWISYNATTKNLSVSLNNNMTTISHEIDLMEILPEKVTIGFSASVENLSIELWEFSSGNFDAINEEKDDHFNMDESEKAINMKLLAVLIAWVGVFVIAIVSIFVVSLARSGREKKKDQEHGVMKLASIYSDLNKEASPPRRFSYRYLAMATDNFSMNGKLGQGGFGAVFKGHLPGANKTVAVKKIFKGSTQGKREYVSEVKIISRMRHKNLVQLIGWCHEKDTSEFLLVYEFMPNGSLDSHLFRKCPPLSWPLRYKISLGLASALLYLHEEWEHSVIHRDIKSSNVLLDSNFTAKLGDFGLARLAKHELNSKTPGLVGTFGYMAPEYISSGRASKESDIFSYGVVLLEIVSGRKCCDHSGKGLVELVWDAYGRGEIIEAILDEKLREGFVEARQVERLSVVGLWCAHPDATQRPSINQVIQVLSFEEAMPNLPQKMPLPTFNHASLKFYNLNFSCPHTNLGLTCTFKPLGI 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14769357 14771864 + Tan0010850.1 Tan01g1459 738883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1459 652 ProSiteProfiles Protein kinase domain profile. 335 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1459 652 Pfam Protein kinase domain 337 602 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1459 652 CDD lectin_legume_LecRK_Arcelin_ConA 21 238 IPR001220 GO:0030246(InterPro)
Tan01g1459 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 240 IPR013320 -
Tan01g1459 652 PANTHER - 38 614 IPR050528 GO:0005886(PANTHER)
Tan01g1459 652 Gene3D - 18 241 - -
Tan01g1459 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1459 652 ProSitePatterns Protein kinases ATP-binding region signature. 341 365 IPR017441 GO:0005524(InterPro)
Tan01g1459 652 SMART serkin_6 335 606 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1459 652 Gene3D Phosphorylase Kinase; domain 1 320 413 - -
Tan01g1459 652 Pfam Legume lectin domain 21 243 IPR001220 GO:0030246(InterPro)
Tan01g1459 652 CDD STKc_IRAK 341 604 - -
Tan01g1459 652 FunFam L-type lectin-domain containing receptor kinase IX.1 320 413 - -
Tan01g1459 652 FunFam Lectin-domain containing receptor kinase A4.3 414 624 - -
Tan01g1459 652 ProSitePatterns Legume lectins alpha-chain signature. 214 223 IPR000985 -
Tan01g1459 652 Gene3D Transferase(Phosphotransferase) domain 1 414 626 - -
Tan01g1459 652 SUPERFAMILY Protein kinase-like (PK-like) 320 632 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1459 Tan-Chr1:14769357 Tan05g1442 Tan-Chr5:24222308 4.50E-176 dispersed
Tan06g2143 Tan-Chr6:71082996 Tan01g1459 Tan-Chr1:14769357 9.80E-38 dispersed
Tan01g1459 Tan-Chr1:14769357 Tan01g1461 Tan-Chr1:14804291 1.20E-141 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67026 PF00069 Pkinase 4.30E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1459 - - - 0.0