Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1461 ATGGCCATCTCCAACTCAAACCCCTTCTTTCTTGGAGTTCATAGAATCCACCATTTCCATGCATTTCAATTCTTGATCTTCTCTTTGATTCTCTTCAAAGTTCACTCACTTTCCTTCACCTTCCCTAGTTTCCAACCAAACAATCCCGACTTATTCTTTGAAGGTGATAGCTTCACCAGCAATGGTGTTATTCAACTCACAAAGAACCAAGCCGATGGCCCGCTCACCGAGAGCGCCGGCCGAGCTTCATACGCCGAACCGATGCGCCTATGGGACGCCTCCACAGGACAGGTTACCGATTTCACCACCCACTTCTCCTTTAGAATCAACACACTTAACGAATCTTTATTTGGTGATGGCATAGCCTTCTTCATCGTCCCTTACGATTCCAGAATCCCCACTAACTCAACTGGGGGTTTTCTTGGTTTATTCAGTGCCGAGTCTGCTTTTGATTCCTCTAAGAATCAAGTTTTTGCAGTTGAATTTGACAGTAAACAGGATGCTTGGGACCCGAGTGACAATCATATAGGAATCAATGTCAATTCCATTGAATCTGTTAATCATCTTGTGTGGAACACTAGCATGAAGGATAACCGAACAGCCAATGCCTGGATAACTTACAATTCCGCCACTAAAAACTTGTCTGTGTTTCTAACTTATGTTAAAGATCCGATTTTTACTGGAAATTTCAGCATCTCAACTGTTGTTGACTTGAAAAATTTACTGCCTGAGAGGGTCAGAATTGGATTCTCCGCTGCCACGGGGAAATGGTTCCAAATACATAACATGATTTCTTGGACCTTCAACTCAACCTTGGACGATAATATTGTTGGAGGTGGAGATAATAATAAGAATATTGGTTTGGCGATTGGCCTTGGTGTTGGGCTTGGTTTTTTGATATGTGGGTTGAGTTTGTTGGGATTTTTTTGGTGGAGGAAACAATTGAAAAGGAGAATGGAAGATTTGGAAGATTCTATAGATGATGAGTTTGAAAGAGGAACTGGCCCAAAAAGGTTCACTTACAGGGAATTAACACAAGCGACAAAGAATTTTGATGAGGCCGGCAAGCTTGGAGAAGGAGGATTTGGTGGCGTTTACAAGGGTTTGTTGACGGAATCCAATACAGAAATAGCAGTAAAGAGGGTTTCGAGAGGATCAAGACAGGGGAAGAAAGAGTATGTATCTGAAGTGAAGATTATCAGTCGTTTGAGACATAGGAATCTTGTTCAACTCTTTGGTTGGTGCCATGAAAAAGGCGAGTTCCTTTTGGTTTATGAGTTCATGCCCAATGGTAGCCTCGATACTCACCTTTTCAGAGGTAAAACCATGCTTACTTGGGAAGTTAGATACAAAATTGCAACAGGGTTGGCTTCTGCTTTGCTATATCTTCACGAAGAATGGGAACAATGTGTGGTGCATAGAGATATCAAGTCCAGCAATGTAATGCTGGACTCAGGTTTCAATGCTAAGCTTGGCGATTTCGGCCTGGCGAGATTTGTAGACCATGAATTGGGCTCGCAAACGACGGTTCTGGCTGGCACCATGGGCTATCTAGCACCAGAGTGCGTGACGGATGGCAAGGCTAGTAAAGAATCAGATGTTTACAGTTTTGGAGTGGTCGCTCTCGAGATCGCCTGTGGGAGGCGGCCGGTGGAATCAAGAGCAGAACCTGATCAGGTGAGGCTTGTAGAGTGGGTGTGGGAGATGTATGGCAGAGGCCAGGCCTTAGAAACTGCAGACAAGAGACTGGAAATGGAGTTTGATGAGCAGCAAATGGAGGCTCTGATGGTGGTGGGATTATGGTGCTGCCATCCTGACTTCAAGATGCGGCCCTCTATAAGACAGGTGATTAATGTTCTAAACTTTGAAGCTCCATTGCCCGCTCTGCCCGCAAAGTTGCCCGTGCCGATGTACTTTGCACCGCCGTTGAATTTATGCAAGTTCACCTACACATCGACGGGCACCACGGATACGCCAGTGGATAGAAGTCAGTGTTCGTGTAGTAACTGCTCGACCTACACCTCGCAATCTTCAAGATCAAGTATGTCGCTTTTGAAATCACAGAGGCATGAGCAATAG 2079 44.88 MAISNSNPFFLGVHRIHHFHAFQFLIFSLILFKVHSLSFTFPSFQPNNPDLFFEGDSFTSNGVIQLTKNQADGPLTESAGRASYAEPMRLWDASTGQVTDFTTHFSFRINTLNESLFGDGIAFFIVPYDSRIPTNSTGGFLGLFSAESAFDSSKNQVFAVEFDSKQDAWDPSDNHIGINVNSIESVNHLVWNTSMKDNRTANAWITYNSATKNLSVFLTYVKDPIFTGNFSISTVVDLKNLLPERVRIGFSAATGKWFQIHNMISWTFNSTLDDNIVGGGDNNKNIGLAIGLGVGLGFLICGLSLLGFFWWRKQLKRRMEDLEDSIDDEFERGTGPKRFTYRELTQATKNFDEAGKLGEGGFGGVYKGLLTESNTEIAVKRVSRGSRQGKKEYVSEVKIISRLRHRNLVQLFGWCHEKGEFLLVYEFMPNGSLDTHLFRGKTMLTWEVRYKIATGLASALLYLHEEWEQCVVHRDIKSSNVMLDSGFNAKLGDFGLARFVDHELGSQTTVLAGTMGYLAPECVTDGKASKESDVYSFGVVALEIACGRRPVESRAEPDQVRLVEWVWEMYGRGQALETADKRLEMEFDEQQMEALMVVGLWCCHPDFKMRPSIRQVINVLNFEAPLPALPAKLPVPMYFAPPLNLCKFTYTSTGTTDTPVDRSQCSCSNCSTYTSQSSRSSMSLLKSQRHEQ 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14804291 14806782 + Tan0018666.1 Tan01g1461 738885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1461 692 ProSiteProfiles Protein kinase domain profile. 351 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1461 692 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Tan01g1461 692 Pfam Protein kinase domain 353 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1461 692 CDD STKc_IRAK 365 621 - -
Tan01g1461 692 Pfam Legume lectin domain 36 273 IPR001220 GO:0030246(InterPro)
Tan01g1461 692 CDD lectin_legume_LecRK_Arcelin_ConA 37 272 IPR001220 GO:0030246(InterPro)
Tan01g1461 692 FunFam L-type lectin-domain containing receptor kinase IX.1 336 427 - -
Tan01g1461 692 PANTHER - 44 658 IPR050528 GO:0005886(PANTHER)
Tan01g1461 692 SMART serkin_6 351 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1461 692 FunFam Lectin-domain containing receptor kinase A4.3 428 640 - -
Tan01g1461 692 FunFam L-type lectin-domain containing receptor kinase IX.1 35 278 - -
Tan01g1461 692 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Tan01g1461 692 SUPERFAMILY Protein kinase-like (PK-like) 335 639 IPR011009 -
Tan01g1461 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1461 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 272 IPR013320 -
Tan01g1461 692 Coils Coil 312 332 - -
Tan01g1461 692 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524(InterPro)
Tan01g1461 692 Gene3D Transferase(Phosphotransferase) domain 1 428 640 - -
Tan01g1461 692 Gene3D - 34 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1461 Tan-Chr1:14804291 Tan05g1465 Tan-Chr5:25986400 1.50E-185 dispersed
Tan01g1459 Tan-Chr1:14769357 Tan01g1461 Tan-Chr1:14804291 1.20E-141 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67027 PF00069 Pkinase 2.10E-51 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1461 - - - 0.0