Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1463 | ATGATTCTCTTATGGCCACAGGAATTTTATGTTGTTTTTTTTCTTCTTTTTTTCCTTCTCTTATTTATTTATTTATATTTATTTATTTATTTTCATCGGTATTTGAATGCCACCTGGCATAGCCAAAATTCCCGTGTTGGCCACCAACTATTCTCAATCAATTCTCAAGTTATAATGGATAATGGTATTGTCCAAGTTACTGTTTCGAGTCCAGATGGTGACGTGGTTGGATTGAGCTACAATGGAATCGATAACATTCTCGAGACCAAAAACGAAGAGCAAAACAGAGGCTACTGGGACGCCGTATGGAACAAGCCAGAGGAACCCATTAGGACGGACAGATTAAAAGGAAGAAGGTTTGAAGTGATAATAGCAGACGAGGAGCAACTGGAAATCTCGTTTAACAAAACATGGAGTTTTGCAGTTGGGAACGAGACGGCCCCTGTAAATGTGGACAAAAGGTACGTATTAATGAGAGGAAGCTCGGGGTTTTATACGTATGCGATATTCGAGAGGCCGACGGGATGGCCGGAGATTGAAATGGATCAAGTTAGGATTGTGTACAAGCTTCACAGCAAAATGTTTGATTATATGGCAGTATCGGAGGATAGGCAGAGGGTGATGCCGACGATGGAGGACCGTGAAAATGGTGAGGCATTGGCGTATCCGGAGGCTGTTCTTTTGACCAATCCTGCTAATGAGGAACTCAGAGGAGAGGTGGATGACAAATACCAGTACTCAATGGAGGACAAGGACAACCAAGTTCACGGCTGGATCTCCAGCGATCCGCCGATGGGATTTTGGATGATCACTCCCAGCGACGAGTTTCGTGTCGCCGGTCCGGTCAAGCAGGATCTCACCTCCCATGCCGGCCCCATTACTCTCTCCATGTTCGTTAGCACCCACTACGCTGGAAAGGACATCGGCATGAGATTTGCAGACGGAGAGCCTTGGAAGAAGGTCTTCGGCCCTGTCTTTGTCTATCTCAACTCTGTTTCCCCTGCGGAGGATTCTCTTTCTCTATGGCAAGATGCCAAACAACAGTTGGCAATGGAAATCAGTAAGTGGCCGTATACCTTTCCTCAATCGGAAGACTTCCCTTCTTCTGCCCAAAGAGGGAGTGTTGCCGGCCGGTTGTTAGTCCGTGATGGGTATATCAGTAGCAGCCTTATGCGTGCGAGTAATGCATTCGTTGGATTGGCATTGCCTGGTCCTGTGGGATCTTGGCAAAGGGAAACCAAGGGCTATCAGTTCTGGACTCGAGCTGACAGTCACGGCAACTTCTTAATCAATAACATCCGAGCTGGGGTTTACAATCTGTATGCTTTTGTCCCTGGCTTTATTGGAGACTACAAATACGAGGCAAATATTACCATCGAGCCTGGGTCTGAAATCAGATTGGATGTGATGGTGTTTGATCCGCCAAGACAGGGCCCAACCATCTGGGAGATCGGCATTCCCGACCGCTCTGCAGCAGAGTTTTATGTGCCCGACCCTTATCCGACTCTCATGAATAAACTATACAATGACCATGTTGACAAGTTCAGACAATATGGCTTGTGGGAACGTTATGCGGCTATGTATCCAAATAATGATCTTGTGTTTACTGTTGGTGTGGATAATTATGCCGAGGACTGGTTCTATGCTCATGTTACCAGGAATGTGGGGAATCAAACATATGAAGCAACCACATGGGAGATCAGATTTTTATTGCAATCTGTGAACCTAACGGCAAATTACACACTGCAAATTGCATTGGCGTCTGCTGCTGAATGCGAATTACAGGTTCGGTTAAACAATCGAGAGCAAGACCAGGCCGCTTTCTCGACAGGGATGATTGGAAGGGACAATGCGATTGCAAGGCATGGCATTCATGGACTTTACTGGTTATACTCCATACCTTTCCCTGGTGATCAATTTCTGGAAGGGAACAACTCCATCTATCTCACTCAGGCAAGAAGCGAAAGCCCTTTCCAAGGTCTCATGTATGACTACATTCGACTCGAAGCTCCACCTCTAACATGA | 2025 | 46.07 | MILLWPQEFYVVFFLLFFLLLFIYLYLFIYFHRYLNATWHSQNSRVGHQLFSINSQVIMDNGIVQVTVSSPDGDVVGLSYNGIDNILETKNEEQNRGYWDAVWNKPEEPIRTDRLKGRRFEVIIADEEQLEISFNKTWSFAVGNETAPVNVDKRYVLMRGSSGFYTYAIFERPTGWPEIEMDQVRIVYKLHSKMFDYMAVSEDRQRVMPTMEDRENGEALAYPEAVLLTNPANEELRGEVDDKYQYSMEDKDNQVHGWISSDPPMGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFVSTHYAGKDIGMRFADGEPWKKVFGPVFVYLNSVSPAEDSLSLWQDAKQQLAMEISKWPYTFPQSEDFPSSAQRGSVAGRLLVRDGYISSSLMRASNAFVGLALPGPVGSWQRETKGYQFWTRADSHGNFLINNIRAGVYNLYAFVPGFIGDYKYEANITIEPGSEIRLDVMVFDPPRQGPTIWEIGIPDRSAAEFYVPDPYPTLMNKLYNDHVDKFRQYGLWERYAAMYPNNDLVFTVGVDNYAEDWFYAHVTRNVGNQTYEATTWEIRFLLQSVNLTANYTLQIALASAAECELQVRLNNREQDQAAFSTGMIGRDNAIARHGIHGLYWLYSIPFPGDQFLEGNNSIYLTQARSESPFQGLMYDYIRLEAPPLT | 674 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 14826805 | 14834070 | + | Tan0013981.1 | Tan01g1463 | 738887 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1463 | 674 | Pfam | Polysaccharide lyase family 4, domain II | 394 | 466 | IPR029413 | - | |
Tan01g1463 | 674 | Gene3D | - | 478 | 669 | - | - | |
Tan01g1463 | 674 | CDD | RGL4_C | 482 | 669 | - | - | |
Tan01g1463 | 674 | SUPERFAMILY | Starch-binding domain-like | 370 | 470 | IPR013784 | GO:0030246(InterPro) | |
Tan01g1463 | 674 | Gene3D | - | 49 | 336 | IPR014718 | GO:0030246(InterPro) | |
Tan01g1463 | 674 | FunFam | Rhamnogalacturonate lyase B | 368 | 467 | - | - | |
Tan01g1463 | 674 | Gene3D | - | 368 | 470 | - | - | |
Tan01g1463 | 674 | SUPERFAMILY | Galactose mutarotase-like | 58 | 337 | IPR011013 | GO:0003824(InterPro)|GO:0005975(InterPro)|GO:0030246(InterPro) | |
Tan01g1463 | 674 | SUPERFAMILY | Galactose-binding domain-like | 478 | 669 | IPR008979 | - | |
Tan01g1463 | 674 | Pfam | Polysaccharide lyase family 4, domain III | 480 | 668 | IPR029411 | - | |
Tan01g1463 | 674 | Pfam | Rhamnogalacturonate lyase family | 52 | 240 | IPR010325 | - | |
Tan01g1463 | 674 | CDD | RGL4_M | 371 | 467 | IPR029413 | - | |
Tan01g1463 | 674 | CDD | RGL4_N | 54 | 338 | - | - | |
Tan01g1463 | 674 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 45 | 672 | IPR051850 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1463 | Tan-Chr1:14826805 | Tan01g3869 | Tan-Chr1:103555986 | 6.20E-229 | dispersed | |
Tan01g1463 | Tan-Chr1:14826805 | Tan02g2451 | Tan-Chr2:93136837 | 9.60E-230 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1463 | K18195 | - | csv:101215252 | 1154.04 |