Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1484 ATGGTTCTTGTTGGTTCTTTGCAACTGTCCAATCATCTGGGACCCTGGAGAAATCATTTGCATGAAGAAAATGTCAAGTTTACCTCTCAGAGGAATAACATACGGTTATTGAATGCAGCCAGTCCATCACATCTTTTATTTCAGCAGAAGAACACTTGGAGCACTTATTTATTTAGCATGAAATACCCATCTAATTACATTGTGCCTTCTAGATACAATGTATTCGGGTGTCATTCGTCATTGATGACAGACCGACCACTGGATCCCCCTGGAATGAAGGCTGCTATAGTGGCATTGACAAGGTTTTGTAATGTATTAGGTGGCTGTCCTCCTCCAGTAGTTAAGTTGGTTCCTGCAGTTTGTATCATCATGTTTGCCGTATGGGGTCTTGGACCATTTTTACGTTATAGTAGAAGCCTACTCCATAGTGATAATAATTGGAAAAAAAGTCGGACATATAATGTCATGACCTTGTATCTTCAACCATTATTGCTATGGACTGGAGCAACACTTATTTGCAGAGCTTTCGATCCAGTAGTTTTACCTACGGAGTCTGGCCAAGTTGTAAAGCAACGGCTATTGAATTTTGTTAGGTCATTGTCCACTGTGCTGGCCTTCGCGTATTGCTTATCAAGTATGATTCAACAAGCACAGAAGTTCTTCTCAGGGACTAGCGAATCCAGTGATGCAAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCAGTATGGGTTGCTGCTGTCTCATTGTTCATGGAGCTGTTGGGCTTTTCTACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTGTTGTTGACGTTGGCAGGCCGTGAGATTTTCACCAACTTCCTTTCAAGTGTGATGATTCATGCGACTCGTCCTTTTGTTGTCAATGAGTGGATTCAAACAAAGATTGAGGGCTATGATGTTTCTGGCACCGTTGAGCATGTAGGATGGTGGTCGCCAACAATTATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAGTTTACCATGAACGTCGTTAGAAATCTCAGTCACAAAACTCACTGGCGGATTAAAACCCACCTAGCCATCAGCCATTTGGACGTCAATAAAATCAATAATATTGTCGCAGACATGCGGAAAGTCTTGGCGAAGAACCCTCAAGTTGAACAACAGAGATTGCATAGAAGAGTATTTTTGGACAACGTGGATCCTGAAAATCAGGCACTTTTGATTCTGATATCTTGTTTTGTCAAGACTTCACATTTTGAAGAATACCTTTGTGTCAAGGAAGCTATAATTTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGGCTTGCTACACCAATCCGCACAATGCAGAAGATGCATAGTGATTCAGACTTGGAAAGTGTTCCATTTTCTGATTCAATATTTGGTAGCAGTGGTGTGACTTTGAATCGCCGCATGCTGATGATCGAACCCCCTTACAAAGTTTATGGAGAAGATAGAAAGCAAAGCCATAGTAGGACATCACGCACAACTGGAGAACAACATGGTAAGCCGATTTCACAGTCATCAGGCGATGGCAAGGCAACTAAAGAGACTACACCATCCGATAGAAAGACAGAAGGAAAGACTGGAGAAGTACGAGAATCTGATACAAAAAAGCATCCCAAAGTTTCAATGTCAACCTCTGCAGATAAATCGAACAATGAATTGAAACATAAATCACCATCAAGGCCTGCGTTGAGTACAAATGGCATCTCTGATATGCCTACTTCTGATGCCAAAACAACTAAGTCAGATGCAGATAATTCATTTGAGGATTCCGGTACCAAGCAATCCGAAAATAGCTTGGGAAGTAACAAGCAGAACTACCAGTCTAGCCATCTTGCCGTTTCCTTTCCGGAAGATGCTAAGAAACCAGGAGGAAATTCAGCAGCAGCTTCACAGCCAAGGATAGAAGGTGAACAGATACCAGTTTCAAATCAATCAACAATGAAGTCTAGCGTAGAAGAGAATATAATCCTTGGTGTTGCTTTGGATGGCTCCAAGAGAACACTTCCTATTGAGGAGGACATGCCTTCTTCCCCTCAAACCGCATCAGGAGCGAAAGATTTGGCTGCACGCTGGCATGGGAACGGGGCAAATGGGGCAACAACTCCGGAAAAGGATACGAAACGTCATACTCCATCTTCTCCTACCACATCTTGTAGTGAATAG 2217 42.58 MVLVGSLQLSNHLGPWRNHLHEENVKFTSQRNNIRLLNAASPSHLLFQQKNTWSTYLFSMKYPSNYIVPSRYNVFGCHSSLMTDRPLDPPGMKAAIVALTRFCNVLGGCPPPVVKLVPAVCIIMFAVWGLGPFLRYSRSLLHSDNNWKKSRTYNVMTLYLQPLLLWTGATLICRAFDPVVLPTESGQVVKQRLLNFVRSLSTVLAFAYCLSSMIQQAQKFFSGTSESSDARNMGFQFAWKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYDVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSHKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNVDPENQALLILISCFVKTSHFEEYLCVKEAIILDLLRVIRHHRARLATPIRTMQKMHSDSDLESVPFSDSIFGSSGVTLNRRMLMIEPPYKVYGEDRKQSHSRTSRTTGEQHGKPISQSSGDGKATKETTPSDRKTEGKTGEVRESDTKKHPKVSMSTSADKSNNELKHKSPSRPALSTNGISDMPTSDAKTTKSDADNSFEDSGTKQSENSLGSNKQNYQSSHLAVSFPEDAKKPGGNSAAASQPRIEGEQIPVSNQSTMKSSVEENIILGVALDGSKRTLPIEEDMPSSPQTASGAKDLAARWHGNGANGATTPEKDTKRHTPSSPTTSCSE 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15068504 15077411 + Tan0006518.1 Tan01g1484 738908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1484 738 MobiDBLite consensus disorder prediction 684 738 - -
Tan01g1484 738 MobiDBLite consensus disorder prediction 495 667 - -
Tan01g1484 738 MobiDBLite consensus disorder prediction 513 530 - -
Tan01g1484 738 MobiDBLite consensus disorder prediction 495 512 - -
Tan01g1484 738 MobiDBLite consensus disorder prediction 531 560 - -
Tan01g1484 738 Pfam Mechanosensitive ion channel, beta-domain 283 354 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan01g1484 738 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Tan01g1484 738 Gene3D - 193 297 - -
Tan01g1484 738 Gene3D - 299 354 IPR023408 -
Tan01g1484 738 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 705 IPR045042 -
Tan01g1484 738 MobiDBLite consensus disorder prediction 574 598 - -
Tan01g1484 738 MobiDBLite consensus disorder prediction 608 630 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1484 Tan-Chr1:15068504 Tan02g2481 Tan-Chr2:93354009 6.90E-197 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1484 K22047 - csv:101217250 1177.54