Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1490 ATGGCGACTAACAAGCTGAAAGAGCCAGTTTGTGTCACCGGAGCCAATGGGTTCATCGGATCGTGGGTCGTCCGTTCGCTGATGGAATCCGGCTATACCACCGTTCATGCCTCCATCTTCCCAGGCTCCGATCCTTCTCATTTGTTCAATCTCCAGGCCTCCACTAACCCTAATGCCAACCTTCGGGTTTTCGAAGCCGACGTAATGGACGGCGAGGCTGTGGCCAGGGCTATGGAAGGCTGCAAGGGCGTATTCCACATTGCGTCCCCCTGCACGCTGGAGGATCCGACTGATCCGCAGAGAGAATTGGTGGAGCCGGCGGTGCAAGGCACTGTCAATGTTCTTGATGCTGCGAAGAAACTCGGGGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCGGCTCTCGTTCCCAACCCTGGTTGGCCCTCCGATAAGCCCTTTGATGAATCCTCGTGGACGGACCTGGACTACTGCAAATCGCGCAAGAAATGGTATCCAGTGTCAAAAACATTGGCGGAGAAAGCAGCATGGGAATTTGTAGAGAAGAATGGAATGGATGTAGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTGCAGCCTAACTTGAATGCAAGTTGTGCTGTATTGCAGCAGTTGCTTCAGGGATCCAAGGATAGTCAGGAATATCACTGGTTGGGGGCTGTGCATGTCAAAGATATTGCGAAAGCACAAGTGTTATTGTTTGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAACGGTATCTATCAATTTGCCGATTTTGCAGACAAAGTCTCGAAAATCTACCCTGAATTTCCTGTTCACAGATTTGTTGGAGAAACACAACCAGGCTTGGTTTCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGATTTCACTCCTCTTGAAGTTGCCATTCGAGATACGGTTGAGAGCCTTAGAAGCAAAGGCTTTTTGGAGCAGTGA 984 49.8 MATNKLKEPVCVTGANGFIGSWVVRSLMESGYTTVHASIFPGSDPSHLFNLQASTNPNANLRVFEADVMDGEAVARAMEGCKGVFHIASPCTLEDPTDPQRELVEPAVQGTVNVLDAAKKLGVRRVVLTSSISALVPNPGWPSDKPFDESSWTDLDYCKSRKKWYPVSKTLAEKAAWEFVEKNGMDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDIAKAQVLLFESPTASGRYLCTNGIYQFADFADKVSKIYPEFPVHRFVGETQPGLVSCKDAAKRLIDLGLDFTPLEVAIRDTVESLRSKGFLEQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15138572 15141773 - Tan0018577.1 Tan01g1490 738914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1490 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 320 IPR036291 -
Tan01g1490 327 Gene3D - 2 327 - -
Tan01g1490 327 CDD FR_SDR_e 10 303 - -
Tan01g1490 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 318 IPR050425 GO:0016616(PANTHER)
Tan01g1490 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Tan01g1490 327 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1490 Tan-Chr1:15138572 Tan08g2390 Tan-Chr8:75228979 2.60E-87 dispersed
Tan01g1490 Tan-Chr1:15138572 Tan06g0468 Tan-Chr6:3411935 5.60E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1490 - - - 0.0