Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1588 ATGAGTCTCCTTATGACCCATTCTGCTGCTGGTTTCGGTGTCAATTCCATCAAATTTCCAACCTCGAAACGTTTACAGACCAAGACACCAGGTAAATATTTCGTGCCTATGAAATTGCTAGGGAGACTATCCGCAGCTGAGGACCAAAGTAAAGATATTGAGTTAGAGAATAAAAACAGCAACAATCATTTTCGGGCCATGGCTTTTGTAAATGCCATTTCTGCGACAAGTTTCCTCGCAGTAGATGCAGCAAAGGCTGAAACTTTGAAGGATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTAGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCGGCTGGGCAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACTAGTTTGGCAGTAATCTTTGGGGCAGGGTTCGTAACTAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGAGCTTTTGGATCAGGGAAGAGCAAAACAGAGGTGGTTGGAAACTCTGTTGCTTTCTCGTTAGGACTTGCTACAACCCTAGCACTGTTGGGCATAGCAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGGTTACCTTTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCGACTACCTTCATTCTTTGACAATTTCGATCCCCGATCTGCCGCTGCCAACTTTCCATCAAGTGTGCAAGCATATCTAGCTGGACTTACATTTGCTTTGGCTGCATCTCCCTGCAGTACTCCTGTGTTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCGGTTGTCGGGGGCAGCCTCCTTTTGACATACACAACTGGCTACGTCGTGCCGCTACTTCTTGCAGCCTCGTTTGCTGGAGCATTGCAGAGCCTTCTGTCATTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGTGCATTACTGTTGGGTGGAGGTGTTTATACTTTCTTGGACAGACTATTTCCAGTCACAATGGCAGCAATGTAG 1080 45.74 MSLLMTHSAAGFGVNSIKFPTSKRLQTKTPGKYFVPMKLLGRLSAAEDQSKDIELENKNSNNHFRAMAFVNAISATSFLAVDAAKAETLKDMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKTEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVVGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRLFPVTMAAM 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16228167 16235776 - Tan0004470.1 Tan01g1588 739012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1588 359 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 103 356 IPR051790 -
Tan01g1588 359 Coils Coil 43 63 - -
Tan01g1588 359 Pfam Cytochrome C biogenesis protein transmembrane region 141 348 IPR003834 GO:0016020(InterPro)|GO:0017004(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1588 Tan-Chr1:16228167 Tan01g1589 Tan-Chr1:16228167 5.40E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1588 - - - 0.0