Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1610 ATGAACGTTGCTACGGGAAATCTTACACTCTACTGCCACAATAACACCGCCGTTGTTTGGTCCGCCAGGTTACTGAAAAAAGTCCTCAATGGGGTGTTGCAGCTATTGGACAATGGAAATCTTGTTCTGCGAGATGGGGAAGATACAAATCCTGAAAACTATTCCTGGCAAAGCTTTGATTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTTGGGTGGGACTTGAGAAATAACTTTGATAGAAGACTGTACGCTTGGAAGAATTCCAACGATCCATCTCCTGGTACCCTTAGTTGGGGGGTGGAGCTTCATGAATATCCTGAGTCTGTTATGTGGAATAATTCCAAAGAATACTTCAGGCTTGGCCCATGGAATGGTGTGGGAATCACTGGTTGGCCAATAGACTTTGTGCCAATGTTGATCGTGAACTATGTTTCCAATGAGGATGAGATTTACTACCAATACTCTGAGGTAAATGCGTATTATACAGCGATGCTGGTGTTGAACCAATCCATTTATGCGCGTACTCTGTACTTGTGGTCTGTAACTGAGGGACAATGGACTGTCTACAATTCATTACCAAGAGATTTCTGCGACAGTTATGCCCTGTGTGGCCCCTATGGCTATTGTGATCTTAGCGTTGTTCCATCTTGTAACTGTCTAGAAGGGTTTAAGCCAAGATCACCTGAGCATTGGAAGGCGGGGAAATTTGCAGATGGTTGTGAACGAAACAAACCGATGAATTGTAGCCATGAAGTTGGGTTTGCACAATTCAACCAGTTGAAATTGCCAGATACAAAACATACTTGGGCAAATGAAAACATGAATCTTGAAGAATGCAAGCAAGAGTGCTTGAGGAACTGTTCTTGTATGGCTTATGCAAATACAAATATCAGTGGGAGTGGCAGTGGTTGTGCCTTATGGATAGGTGATATCATTGACTTGAAAATAATTTCCGGTGCTGGACAGGATTTATATGTCAGAATGCTAGCGTCAGAAGTTGCCAAGCATAGAAAGGCACACGAAAGATTAAATCCTAAGGTGAAGATTGCCATAGTCGTGATTGCCACTGGTTTAGTTTTGGCCATCCTCTACATTTGCTTATACATTTTCAAAAAGAGGTCAACCTTCAAAGATGATCAGCATGAGAAATTAGAAGCTGAAGACTTGGAGCTTCCCTTGTTTGATCTATCCTTGATAAATAGTGCCACTAATAGCTTCTCACTTGATAATAAAATTGGAGAAGGCGGCTTTGGACCAGTATATAAGGGTACGCTTACAAATGGTCAAGATATTGCCGTGAAGAGACTTTCACAGAGTTCTGGACAGGGAATAAATGAGTTCAAGAATGAAGTAATCCTATCTGCAAAGCTTCAACATCGAAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAAGGAGACGAGAAAATGTTAGTTTACGAGTACATGCCGAACAAAAGTTTGGACTTCTTTATATTTGATGAAGCACGACGTCGACTATTAGATTGGTCGCAACGGTATCGCATTATCTGTGGGATTGCAAGAGGACTTGTGTATCTTCATCAAGATTCCAGATTGAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTTGCTAAAACTTGTGGTGGGGATCAAACTGAAGGAGAGACGATAAGAGTAGTCGGAACCTATGGATATATGGCTCCAGAATATGCTTTTGATGGACAATTCTCAACAAAGTCTGATACATTTAGTTATGGCATTTTGTTGTTGGAGATCATTAGTGGAAAAAGAAGCAGAGGATTTCGTCACTTGAATGACCAAAATCTCATTGGATATGCATGGCGATTGTGGAAAGAGGGAAATCCAGCAGAATTGATCGACGATGGCATTCAAGAAACGTGCAATTTCTCTGAGGTATTGAGATGTATCAATATCAGTTTGTTGTGTGTTCAACAACATCCCAATGATCGACCCACAATGTCATTAGTGGTTATGATGTTAGGTTGTAAAATTCCTTTGTTGCAACCGAAACAACCAGGATTTTTCATAGAAAGTCAAGGCATTGCAATGGATGGCTACTCAGGTAAAGAAAAATCAGCTTCAACTAGTGGGTTGACGTTTACATTCTCAGATGCTCAGTAA 2175 40.64 MNVATGNLTLYCHNNTAVVWSARLLKKVLNGVLQLLDNGNLVLRDGEDTNPENYSWQSFDYPTDTLLPGMKLGWDLRNNFDRRLYAWKNSNDPSPGTLSWGVELHEYPESVMWNNSKEYFRLGPWNGVGITGWPIDFVPMLIVNYVSNEDEIYYQYSEVNAYYTAMLVLNQSIYARTLYLWSVTEGQWTVYNSLPRDFCDSYALCGPYGYCDLSVVPSCNCLEGFKPRSPEHWKAGKFADGCERNKPMNCSHEVGFAQFNQLKLPDTKHTWANENMNLEECKQECLRNCSCMAYANTNISGSGSGCALWIGDIIDLKIISGAGQDLYVRMLASEVAKHRKAHERLNPKVKIAIVVIATGLVLAILYICLYIFKKRSTFKDDQHEKLEAEDLELPLFDLSLINSATNSFSLDNKIGEGGFGPVYKGTLTNGQDIAVKRLSQSSGQGINEFKNEVILSAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDEARRRLLDWSQRYRIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTEGETIRVVGTYGYMAPEYAFDGQFSTKSDTFSYGILLLEIISGKRSRGFRHLNDQNLIGYAWRLWKEGNPAELIDDGIQETCNFSEVLRCINISLLCVQQHPNDRPTMSLVVMMLGCKIPLLQPKQPGFFIESQGIAMDGYSGKEKSASTSGLTFTFSDAQ 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16356093 16360154 + Tan0002296.2 Tan01g1610 739034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1610 724 Gene3D Transferase(Phosphotransferase) domain 1 484 682 - -
Tan01g1610 724 Pfam S-locus glycoprotein domain 120 228 IPR000858 GO:0048544(InterPro)
Tan01g1610 724 ProSiteProfiles PAN/Apple domain profile. 250 331 IPR003609 -
Tan01g1610 724 Pfam Protein tyrosine and serine/threonine kinase 409 676 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1610 724 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 373 483 - -
Tan01g1610 724 SUPERFAMILY Protein kinase-like (PK-like) 393 678 IPR011009 -
Tan01g1610 724 Gene3D Hepatocyte Growth Factor 247 325 - -
Tan01g1610 724 PIRSF SRK 1 724 IPR024171 GO:0004674(InterPro)
Tan01g1610 724 SMART ntp_6 251 330 IPR003609 -
Tan01g1610 724 CDD PAN_AP_plant 247 329 - -
Tan01g1610 724 SMART serkin_6 408 685 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1610 724 ProSiteProfiles Bulb-type lectin domain profile. 1 56 IPR001480 -
Tan01g1610 724 Gene3D Phosphorylase Kinase; domain 1 370 483 - -
Tan01g1610 724 CDD STKc_IRAK 414 678 - -
Tan01g1610 724 SUPERFAMILY alpha-D-mannose-specific plant lectins 5 93 IPR036426 -
Tan01g1610 724 Gene3D - 3 85 IPR036426 -
Tan01g1610 724 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 692 - -
Tan01g1610 724 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 686 - -
Tan01g1610 724 Pfam PAN-like domain 250 316 IPR003609 -
Tan01g1610 724 ProSiteProfiles Protein kinase domain profile. 408 685 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1610 724 Pfam D-mannose binding lectin 5 88 IPR001480 -
Tan01g1610 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1610 Tan-Chr1:16356093 Tan01g1612 Tan-Chr1:16356316 0.00E+00 dispersed
Tan01g1610 Tan-Chr1:16356093 Tan01g1611 Tan-Chr1:16356093 0.00E+00 tandem
Tan01g1610 Tan-Chr1:16356093 Tan05g3187 Tan-Chr5:83916792 2.40E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67033 PF07714 PK_Tyr_Ser-Thr 4.10E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1610 - - - 0.0