Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1612 ATGGACTCTTTCTCTCCAATACTAATCGCTTTTAACTTGGCTTTTTATCTCTTCAGGTCTGTAGCTGCCAATGATTCCTTAACTACTCAAAACCCATTTATCAGCGATGACCTTAATGTTAGCAGTTTGGTCTCCAGAAATGGAAACTTCGAATTGGGTTTCTTCAGTCCTGGCCTTAATAGTAACCGTTACTTGGGAATCTGGTTCAAGAATCGGCGAGGTCCGACCTCTGTTTGGATTGCAAACAGGGAAAACCCCATTAATGACTCGTCTGGTGTATTGGTGATGAACGTTGCTACGGGAAATCTTACACTCTACTGCCACAATAACACCGCCGTTGTTTGGTCCGCCAGGTTACTGAAAAAAGTCCTCAATGGGGTGTTGCAGCTATTGGACAATGGAAATCTTGTTCTGCGAGATGGGGAAGATACAAATCCTGAAAACTATTCCTGGCAAAGCTTTGATTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTTGGGTGGGACTTGAGAAATAACTTTGATAGAAGACTGTACGCTTGGAAGAATTCCAACGATCCATCTCCTGGTACCCTTAGTTGGGGGGTGGAGCTTCATGAATATCCTGAGTCTGTTATGTGGAATAATTCCAAAGAATACTTCAGGCTTGGCCCATGGAATGGTGTGGGAATCACTGGTTGGCCAATAGACTTTGTGCCAATGTTGATCGTGAACTATGTTTCCAATGAGGATGAGATTTACTACCAATACTCTGAGGTAAATGCGTATTATACAGCGATGCTGGTGTTGAACCAATCCATTTATGCGCGTACTCTGTACTTGTGGTCTGTAACTGAGGGACAATGGACTGTCTACAATTCATTACCAAGAGATTTCTGCGACAGTTATGCCCTGTGTGGCCCCTATGGCTATTGTGATCTTAGCGTTGTTCCATCTTGTAACTGTCTAGAAGGGTTTAAGCCAAGATCACCTGAGCATTGGAAGGCGGGGAAATTTGCAGATGGTTGTGAACGAAACAAACCGATGAATTGTAGCCATGAAGTTGGGTTTGCACAATTCAACCAGTTGAAATTGCCAGATACAAAACATACTTGGGCAAATGAAAACATGAATCTTGAAGAATGCAAGCAAGAGTGCTTGAGGAACTGTTCTTGTATGGCTTATGCAAATACAAATATCAGTGGGAGTGGCAGTGGTTGTGCCTTATGGATAGGTGATATCATTGACTTGAAAATAATTTCCGGTGCTGGACAGGATTTATATGTCAGAATGCTAGCGTCAGAAGTTGCCAAGCATAGAAAGGCACACGAAAGATTAAATCCTAAGGTGAAGATTGCCATAGTCGTGATTGCCACTGGTTTAGTTTTGGCCATCCTCTACATTTGCTTATACATTTTCAAAAAGAGGTCAACCTTCAAAGATGATCAGCATGAGAAATTAGAAGCTGAAGACTTGGAGCTTCCCTTGTTTGATCTATCCTTGATAAATAGTGCCACTAATAGCTTCTCACTTGATAATAAAATTGGAGAAGGCGGCTTTGGACCAGTATATAAGGGTACGCTTACAAATGGTCAAGATATTGCCGTGAAGAGACTTTCACAGAGTTCTGGACAGGGAATAAATGAGTTCAAGAATGAAGTAATCCTATCTGCAAAGCTTCAACATCGAAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAAGGAGACGAGAAAATGTTAGTTTACGAGTACATGCCGAACAAAAGTTTGGACTTCTTTATATTTGATGAAGCACGACGTCGACTATTAGATTGGTCGCAACGGTATCGCATTATCTGTGGGATTGCAAGAGGACTTGTGTATCTTCATCAAGATTCCAGATTGAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTTGCTAAAACTTGTGGTGGGGATCAAACTGAAGGAGAGACGATAAGAGTAGTCGGAACCTATGGATATATGGCTCCAGAATATGCTTTTGATGGACAATTCTCAACAAAGTCTGATACATTTAGTTATGGCATTTTGTTGTTGGAGATCATTAGTGGAAAAAGAAGCAGAGGATTTCGTCACTTGAATGACCAAAATCTCATTGGATATGCATGGCGATTGTGGAAAGAGGGAAATCCAGCAGAATTGATCGACGATGGCATTCAAGAAACGTGCAATTTCTCTGAGGTATTGAGATGTATCAATATCAGTTTGTTGTGTGTTCAACAACATCCCAATGATCGACCCACAATGTCATTAGTGGTTATGATGTTAGGTTGTAAAATTCCTTTGTTGCAACCGAAACAACCAGGATTTTTCATAGAAAGTCAAGGCATTGCAATGGATGGCTACTCAGGTAAAGAAAAATCAGCTTCAACTAGTGGGTTGACGTTTACATTCTCAGATGCTCAGTAA 2460 40.85 MDSFSPILIAFNLAFYLFRSVAANDSLTTQNPFISDDLNVSSLVSRNGNFELGFFSPGLNSNRYLGIWFKNRRGPTSVWIANRENPINDSSGVLVMNVATGNLTLYCHNNTAVVWSARLLKKVLNGVLQLLDNGNLVLRDGEDTNPENYSWQSFDYPTDTLLPGMKLGWDLRNNFDRRLYAWKNSNDPSPGTLSWGVELHEYPESVMWNNSKEYFRLGPWNGVGITGWPIDFVPMLIVNYVSNEDEIYYQYSEVNAYYTAMLVLNQSIYARTLYLWSVTEGQWTVYNSLPRDFCDSYALCGPYGYCDLSVVPSCNCLEGFKPRSPEHWKAGKFADGCERNKPMNCSHEVGFAQFNQLKLPDTKHTWANENMNLEECKQECLRNCSCMAYANTNISGSGSGCALWIGDIIDLKIISGAGQDLYVRMLASEVAKHRKAHERLNPKVKIAIVVIATGLVLAILYICLYIFKKRSTFKDDQHEKLEAEDLELPLFDLSLINSATNSFSLDNKIGEGGFGPVYKGTLTNGQDIAVKRLSQSSGQGINEFKNEVILSAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDEARRRLLDWSQRYRIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTEGETIRVVGTYGYMAPEYAFDGQFSTKSDTFSYGILLLEIISGKRSRGFRHLNDQNLIGYAWRLWKEGNPAELIDDGIQETCNFSEVLRCINISLLCVQQHPNDRPTMSLVVMMLGCKIPLLQPKQPGFFIESQGIAMDGYSGKEKSASTSGLTFTFSDAQ 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16356316 16360154 + Tan0002296.1 Tan01g1612 739036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1612 819 PIRSF SRK 1 819 IPR024171 GO:0004674(InterPro)
Tan01g1612 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 188 IPR036426 -
Tan01g1612 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 787 - -
Tan01g1612 819 Pfam Protein tyrosine and serine/threonine kinase 504 771 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1612 819 CDD PAN_AP_plant 342 424 - -
Tan01g1612 819 SMART serkin_6 503 780 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1612 819 CDD STKc_IRAK 509 773 - -
Tan01g1612 819 SMART ntp_6 346 425 IPR003609 -
Tan01g1612 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 781 - -
Tan01g1612 819 SUPERFAMILY Protein kinase-like (PK-like) 488 773 IPR011009 -
Tan01g1612 819 ProSiteProfiles Bulb-type lectin domain profile. 24 151 IPR001480 -
Tan01g1612 819 Pfam S-locus glycoprotein domain 215 323 IPR000858 GO:0048544(InterPro)
Tan01g1612 819 CDD B_lectin 41 157 IPR001480 -
Tan01g1612 819 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Tan01g1612 819 Pfam D-mannose binding lectin 76 183 IPR001480 -
Tan01g1612 819 Gene3D - 22 154 IPR036426 -
Tan01g1612 819 Gene3D Hepatocyte Growth Factor 342 420 - -
Tan01g1612 819 Pfam PAN-like domain 345 411 IPR003609 -
Tan01g1612 819 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1612 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Tan01g1612 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1612 819 Gene3D Phosphorylase Kinase; domain 1 465 578 - -
Tan01g1612 819 Gene3D Transferase(Phosphotransferase) domain 1 579 777 - -
Tan01g1612 819 SMART blect_4 34 157 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1610 Tan-Chr1:16356093 Tan01g1612 Tan-Chr1:16356316 0.00E+00 dispersed
Tan01g1612 Tan-Chr1:16356316 Tan01g1617 Tan-Chr1:16422674 0.00E+00 dispersed
Tan01g1611 Tan-Chr1:16356093 Tan01g1612 Tan-Chr1:16356316 0.00E+00 tandem
Tan01g1612 Tan-Chr1:16356316 Tan01g1613 Tan-Chr1:16356316 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67035 PF07714 PK_Tyr_Ser-Thr 5.30E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1612 - - - 0.0