Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1619 ATGGATTTTTTCTATCAGACACTAATCGCTTTAAACTTAGCTTTTTGTCTCTTCAGGTCTGTAGCTGCCATTGATTCCTTAACAGCTCAAATCCCATTTCTCAGCGACGGGCTTAATGGTAGCAGTTTGGTCTCCAAAAATGGAAACTTCGAATTGGGTTTCTTCAGTCCTGGTCTTCCTAGCGACCGTTACTTGGGAATCTGGTTCAAGAATCGACGAGGTCCGACCTCTGTTTGGGTTGCAAACAGAGAAATCCCCATTAACGACTCATCTGGTGTATTGGTGATGAACGTTACTACAGGAAATCTTACACTTTATAGCCACAATAACACCATCGTTGTTTGGTCTGCCAGGTTACTGAGAAAAGTCCCCAATGGGGTATTGCAGCTATTGGACAATGGAAATCTTGTGCTGAGAGATGGTGAAGATGCAAATCCTCAAAACTATTCATGGCAAAGCTTTGACTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTGGGTTGGGACTTGAGAAATAATATTGATAGAAGATTGTCTGCTTGGAAAAATCCTAATGACCCATCTCCTGGAAGCCTCAGTTGGAGGATGGAGCTTCATGAATATCCGGAGACTGTTATGTGGAATGGTTCCAAAGAATACTTTAGGCATGGCCCATGGAATGGTGTGACAATCACTAGTTGGCCTCTAGGCTTAGCGCCAAACTTGATACTCCACTTTGTTACTAATGAGGATGAGGTTTACTACCAATACACTGTAAGAAATGAGTCTGCTGGTAAAGTGATGCTGGTGTTGAACCAATCCATTAACGTGCGCACAGTGTACTTATGGTCTGTAACCGAGGGAAAATGGACGGTCTACAATTCGCTACCAAGAGATTTCTGTGACAATTATGCTCTGTGTGGTCCCTTTGGATATTGTGATTTTAGGGTCGTTCCATCTTGTAATTGTCTAGAAGGGTTTAAGCCTAGATCACCTGAGAATTGGAAGGCAGGGGAATTTGTGGATGGTTGTGAACGAAACAAACCGATGAATTGTGGGGATGAAGTTGGGTTTGCACAATTCAACGAAATGAAATTGCCTGACACAACACATACTTGGGTGAACAGAAGCATGAATCTTGAAGAATGCAAGCAAAAATGCTTGAGGAATTGTTCGTGTATGGCTTATGCCAATACAAATATCAGTGGGAGTGGCAGCGGTTGTGCCTTATGGATAGGTGATATCATTGACCTGAAAATAATTCCCGGTGCTGGACAGGATTTGTATGTTAGGATGCTAGCATCAGAATTAGTCAAGAATAGAGAGGTACGTAAAAGATTGAATCCTAAGGTGAAGATTGCTTTGGTTGGGATTGCCACTGCTGTAGTTTTGGCTATTCTCTTCATATGCTTATACATTTTCAAAAAGAGATCAACCTTCAAAGATGATCAGCATGAGAAATTAGAAGCTGAAGACTTGGAGCTTCCCTTGTTTGATCTATCCTTGATAAATAGTGCCACTAATAACTTCTCACTTGATAATAAGCTTGGAGAAGGTGGCTTTGGACCGGTATATAAGGGTAAGCTTACAAATGGACAAGATATTGCTGTGAAGAGACTTTCAAAGAGTTCTGGACAGGGAATGAATGAGTTCAAGAATGAAGTAGCCGTAACTGCAAAGCTTCAACACCGAAATCTTGTAAAACTTCTGGGGTGCTGCATTCAAGGAGATGAGAAACTGCTAGTTTACGAGTACATGCCAAACAAAAGTTTAGACTTCTTTATATTTGATGAAACGCGACGTAGACTATTAAATTGGTCGGAACGATATCATATTATCTGTGGGATTGCAAGAGGACTTGCATATCTTCATCAAGATTCCAGATTGAGAATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAGATTTCTGATTTTGGTCTTGCTAAGACTTGTGGAGGGGATCAAACCGAAGGAGAGACAATAAGAGTGGTTGGAACCTAG 2010 41.0 MDFFYQTLIALNLAFCLFRSVAAIDSLTAQIPFLSDGLNGSSLVSKNGNFELGFFSPGLPSDRYLGIWFKNRRGPTSVWVANREIPINDSSGVLVMNVTTGNLTLYSHNNTIVVWSARLLRKVPNGVLQLLDNGNLVLRDGEDANPQNYSWQSFDYPTDTLLPGMKLGWDLRNNIDRRLSAWKNPNDPSPGSLSWRMELHEYPETVMWNGSKEYFRHGPWNGVTITSWPLGLAPNLILHFVTNEDEVYYQYTVRNESAGKVMLVLNQSINVRTVYLWSVTEGKWTVYNSLPRDFCDNYALCGPFGYCDFRVVPSCNCLEGFKPRSPENWKAGEFVDGCERNKPMNCGDEVGFAQFNEMKLPDTTHTWVNRSMNLEECKQKCLRNCSCMAYANTNISGSGSGCALWIGDIIDLKIIPGAGQDLYVRMLASELVKNREVRKRLNPKVKIALVGIATAVVLAILFICLYIFKKRSTFKDDQHEKLEAEDLELPLFDLSLINSATNNFSLDNKLGEGGFGPVYKGKLTNGQDIAVKRLSKSSGQGMNEFKNEVAVTAKLQHRNLVKLLGCCIQGDEKLLVYEYMPNKSLDFFIFDETRRRLLNWSERYHIICGIARGLAYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTEGETIRVVGT 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16422674 16426527 + Tan0008374.3 Tan01g1619 739043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1619 669 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 188 IPR036426 -
Tan01g1619 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1619 669 Pfam Protein tyrosine and serine/threonine kinase 505 657 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1619 669 Pfam D-mannose binding lectin 76 183 IPR001480 -
Tan01g1619 669 Gene3D Transferase(Phosphotransferase) domain 1 580 669 - -
Tan01g1619 669 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Tan01g1619 669 ProSiteProfiles Protein kinase domain profile. 504 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1619 669 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 30 669 - -
Tan01g1619 669 SMART ntp_6 347 426 IPR003609 -
Tan01g1619 669 SMART blect_4 34 157 IPR001480 -
Tan01g1619 669 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 580 669 - -
Tan01g1619 669 SUPERFAMILY Protein kinase-like (PK-like) 489 669 IPR011009 -
Tan01g1619 669 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 579 - -
Tan01g1619 669 SMART serkin_6 504 667 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1619 669 CDD B_lectin 38 157 IPR001480 -
Tan01g1619 669 Pfam PAN-like domain 347 412 IPR003609 -
Tan01g1619 669 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Tan01g1619 669 CDD PAN_AP_plant 343 425 - -
Tan01g1619 669 Gene3D - 30 154 IPR036426 -
Tan01g1619 669 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544(InterPro)
Tan01g1619 669 Gene3D Phosphorylase Kinase; domain 1 466 579 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1619 Tan-Chr1:16422674 Tan01g1622 Tan-Chr1:16430635 0.00E+00 dispersed
Tan01g1618 Tan-Chr1:16422674 Tan01g1619 Tan-Chr1:16422674 0.00E+00 tandem
Tan01g1619 Tan-Chr1:16422674 Tan01g1620 Tan-Chr1:16422674 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67039 PF00069 Pkinase 7.70E-34 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1619 - - - 0.0