Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1621 ATGAACATCACAACAGGAAATCTTACACTCTATAGCCACAATTCCACCGCCGTTGCTTGGTCCGCTAGGTTACTGAGAAAAGTTCCCAATGGGGTACTCCAGCTATTGGACACTGGAAATCTTGTGCTGAGAAATGGGGAAGATGAAAATCCCCAAAACTACTCCTGGCAAAGCTTTGATTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTGGGTTGGGATTTGAGGCATAACATTGATAGAAGATTAGACGCTTGGAAGAATCCCAATGACCCAGCTCCTGGAAACCTCAGTTGGAGGATGGAGCTTCATGAATATCCTGAGTCTGTGATGTGGAAAGGTTCCCAAGAATACTTCAGGCATGGCCCATGGAATGGTGTGAGAGTCACTAGTAGACCACTAGGCATAGCGCCAATTCTGAACTTCAACTTTGTTTCAAATGAGGATGAGGTTTACTACCAATACTCTGTTGTTAATAAGTCTCATACCGTGATGGTGGTAATGAACCAATCCAATTACATGCGCATAATGTACTTGTGGTCTGCAGCTGAGAGACAGTGGAGACTTTACACTTCATTACCAAGAGATTTCTGTGACAATTATGCCCTGTGTGGCCCCTATGGATATTGCGATATAAGGGTCACTCCATCTTGTAAATGTCTAGAAGGGTTTAAGCCAAGATCACCTGATAGTTGGAAGGCAGGGGAATTTGCGGACGGTTGTGAACGGAACAAACTGATGAATTGTGGTGATGAAGTTGGGTTTGCACAGTTCAACCAGCTGAAATTGCCAGATACAAAGTATACTTGGGTCAACAAAAGCATGAATCTTGAAGAATGCAAGCAAAAATGCTTGAGAAATTGTTCTTGTATGGCTTATGCTAATACTAATATCAGTGGCAGTGGCAGTGGCTGTGCCTTATGGATTGGTGATCTAATTGACTTGAAATTGATCCCGGACGCAGGACAGGATTTATATGTCAGGATGCTTGCCTCAGAATTAGTCAAGCATGGAGAGGCACACAAAACTGAAGGATTGAATCCGAAGGTGAAGATTGCTTTGGTTGTGATTGCCGCCGGTTTTGTTTTGGCTATCCTCTTCATATGCTTATACATTTTCAAAAAGAGATCAACCTTCAAAGATGACCATGAGAAAATAGAAGCTGAAGAGCTGGAGCTTCCCTTGTTTGATCTATCCTTAATAAATAGTGCCACGAATAACTTCTCACTTAATAATAAGCTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATATTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAGGGAATGAATGAATTTAAGAACGAAGTAATCCTAATTGCAAAACTTCAACATCGAAATCTCGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGACGAGAAAATGCTAATTTACGAGTATATGCCGAACAAAAGTCTGGACTTCTTTATATTTGATCGAACACAACGTCAATTACTAGACTGGTCGAAACGGTATCACATTATTTGTGGAATTGCTAGAGGACTCGTGTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATTTAAAACCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTAGCTAAAACTTGCGGTGGGGATCAAACTGAAGGACGGACAATAAGAGTGGTTGGAACTTATGGATATATGGCACCGGAATATGCTTTTGATGGACAATTCTCAGTGAAATCTGATGCATTTAGTTATGGCATTTTGTTGTTGGAGATCATCAGTGGAAAAAGAAGCCGAGGTTTCTGTCATTCGAGTGACCAAAATCTTATTGCATATGCATGGCGACTGTGGAAAGAAGGAAATCCAGAAGAATTAATCGACGACGCCATTCGCGAAACGTGCACCCTTTCAGAGGTATTGAGATGTATCAATATAAGTTTATTGTGTGTTCAACAACATTCCAATGATCGACCCACAATGTCATCGGTGGTTATGATGTTAGGCTGTGAAATTCCTTTGTCACAACCAAAACAGCCAGGATTTTTCATAGAAAATGAAGTCATTGCAATGAAGAATGAGTCGAGTAAAGATAAATCAACTTCAAATAATGAATTAACTATTACACTCCCAGATCCCAGGTAA 2178 40.63 MNITTGNLTLYSHNSTAVAWSARLLRKVPNGVLQLLDTGNLVLRNGEDENPQNYSWQSFDYPTDTLLPGMKLGWDLRHNIDRRLDAWKNPNDPAPGNLSWRMELHEYPESVMWKGSQEYFRHGPWNGVRVTSRPLGIAPILNFNFVSNEDEVYYQYSVVNKSHTVMVVMNQSNYMRIMYLWSAAERQWRLYTSLPRDFCDNYALCGPYGYCDIRVTPSCKCLEGFKPRSPDSWKAGEFADGCERNKLMNCGDEVGFAQFNQLKLPDTKYTWVNKSMNLEECKQKCLRNCSCMAYANTNISGSGSGCALWIGDLIDLKLIPDAGQDLYVRMLASELVKHGEAHKTEGLNPKVKIALVVIAAGFVLAILFICLYIFKKRSTFKDDHEKIEAEELELPLFDLSLINSATNNFSLNNKLGEGGFGPVYKGKLTNGQDIAVKRLSQSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLIYEYMPNKSLDFFIFDRTQRQLLDWSKRYHIICGIARGLVYLHQDSRLRIIHRDLKPSNVLLDMDMNPKISDFGLAKTCGGDQTEGRTIRVVGTYGYMAPEYAFDGQFSVKSDAFSYGILLLEIISGKRSRGFCHSSDQNLIAYAWRLWKEGNPEELIDDAIRETCTLSEVLRCINISLLCVQQHSNDRPTMSSVVMMLGCEIPLSQPKQPGFFIENEVIAMKNESSKDKSTSNNELTITLPDPR 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16430463 16434240 + Tan0017664.2 Tan01g1621 739045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1621 725 Pfam S-locus glycoprotein domain 120 228 IPR000858 GO:0048544(InterPro)
Tan01g1621 725 CDD STKc_IRAK 415 679 - -
Tan01g1621 725 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 693 - -
Tan01g1621 725 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 374 484 - -
Tan01g1621 725 Gene3D - 1 106 - -
Tan01g1621 725 Pfam PAN-like domain 251 316 IPR003609 -
Tan01g1621 725 Gene3D Transferase(Phosphotransferase) domain 1 485 686 - -
Tan01g1621 725 ProSiteProfiles Bulb-type lectin domain profile. 1 56 IPR001480 -
Tan01g1621 725 PIRSF SRK 1 725 IPR024171 GO:0004674(InterPro)
Tan01g1621 725 Pfam Protein tyrosine and serine/threonine kinase 410 678 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1621 725 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 485 687 - -
Tan01g1621 725 SUPERFAMILY Protein kinase-like (PK-like) 394 679 IPR011009 -
Tan01g1621 725 SUPERFAMILY alpha-D-mannose-specific plant lectins 5 93 IPR036426 -
Tan01g1621 725 ProSiteProfiles PAN/Apple domain profile. 250 331 IPR003609 -
Tan01g1621 725 ProSiteProfiles Protein kinase domain profile. 409 693 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1621 725 Gene3D Phosphorylase Kinase; domain 1 382 484 - -
Tan01g1621 725 SMART serkin_6 409 672 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1621 725 MobiDBLite consensus disorder prediction 705 725 - -
Tan01g1621 725 CDD PAN_AP_plant 248 329 - -
Tan01g1621 725 MobiDBLite consensus disorder prediction 706 725 - -
Tan01g1621 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1621 725 SMART ntp_6 251 330 IPR003609 -
Tan01g1621 725 Gene3D Hepatocyte Growth Factor 247 326 - -
Tan01g1621 725 Pfam D-mannose binding lectin 4 88 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1621 Tan-Chr1:16430463 Tan01g1623 Tan-Chr1:16430635 0.00E+00 dispersed
Tan01g1620 Tan-Chr1:16422674 Tan01g1621 Tan-Chr1:16430463 0.00E+00 tandem
Tan01g1621 Tan-Chr1:16430463 Tan01g1622 Tan-Chr1:16430635 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67041 PF07714 PK_Tyr_Ser-Thr 2.10E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1621 - - - 0.0