Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1622 ATGGACTCTTTCTCTTCAACACTCCTTGTCTTTAACTTTAACTTGGTCTTTTTCCTCTTCAGGTCTGCAGCTGCCACTGATTCCTTAACGGCTCAAAACCCATTTCTCCGAGATGGGCTTACTCTGGTCTCCAGAAATGGAAATTTCGAATTGGGTTTCTTCAGTCCTGGTCTTTCAACCGACCGTTACTTGGGAATTTGGTTCAAGAATCGGCGAGGTCCGACCTCCGTTTGGGTTGCGAACAGGAAAACACCCATTAATGATTCGTCTGGTGTACTGGTGATGAACATCACAACAGGAAATCTTACACTCTATAGCCACAATTCCACCGCCGTTGCTTGGTCCGCTAGGTTACTGAGAAAAGTTCCCAATGGGGTACTCCAGCTATTGGACACTGGAAATCTTGTGCTGAGAAATGGGGAAGATGAAAATCCCCAAAACTACTCCTGGCAAAGCTTTGATTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTGGGTTGGGATTTGAGGCATAACATTGATAGAAGATTAGACGCTTGGAAGAATCCCAATGACCCAGCTCCTGGAAACCTCAGTTGGAGGATGGAGCTTCATGAATATCCTGAGTCTGTGATGTGGAAAGGTTCCCAAGAATACTTCAGGCATGGCCCATGGAATGGTGTGAGAGTCACTAGTAGACCACTAGGCATAGCGCCAATTCTGAACTTCAACTTTGTTTCAAATGAGGATGAGGTTTACTACCAATACTCTGTTGTTAATAAGTCTCATACCGTGATGGTGGTAATGAACCAATCCAATTACATGCGCATAATGTACTTGTGGTCTGCAGCTGAGAGACAGTGGAGACTTTACACTTCATTACCAAGAGATTTCTGTGACAATTATGCCCTGTGTGGCCCCTATGGATATTGCGATATAAGGGTCACTCCATCTTGTAAATGTCTAGAAGGGTTTAAGCCAAGATCACCTGATAGTTGGAAGGCAGGGGAATTTGCGGACGGTTGTGAACGGAACAAACTGATGAATTGTGGTGATGAAGTTGGGTTTGCACAGTTCAACCAGCTGAAATTGCCAGATACAAAGTATACTTGGGTCAACAAAAGCATGAATCTTGAAGAATGCAAGCAAAAATGCTTGAGAAATTGTTCTTGTATGGCTTATGCTAATACTAATATCAGTGGCAGTGGCAGTGGCTGTGCCTTATGGATTGGTGATCTAATTGACTTGAAATTGATCCCGGACGCAGGACAGGATTTATATGTCAGGATGCTTGCCTCAGAATTAGTCAAGCATGGAGAGGCACACAAAACTGAAGGATTGAATCCGAAGGTGAAGATTGCTTTGGTTGTGATTGCCGCCGGTTTTGTTTTGGCTATCCTCTTCATATGCTTATACATTTTCAAAAAGAGATCAACCTTCAAAGATGACCATGAGAAAATAGAAGCTGAAGAGCTGGAGCTTCCCTTGTTTGATCTATCCTTAATAAATAGTGCCACGAATAACTTCTCACTTAATAATAAGCTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATATTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAGGGAATGAATGAATTTAAGAACGAAGTAATCCTAATTGCAAAACTTCAACATCGAAATCTCGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGACGAGAAAATGCTAATTTACGAGTATATGCCGAACAAAAGTCTGGACTTCTTTATATTTGATCGAACACAACGTCAATTACTAGACTGGTCGAAACGGTATCACATTATTTGTGGAATTGCTAGAGGACTCGTGTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATTTAAAACCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTAGCTAAAACTTGCGGTGGGGATCAAACTGAAGGACGGACAATAAGAGTGGTTGGAACTTATGGATATATGGCACCGGAATATGCTTTTGATGGACAATTCTCAGTGAAATCTGATGCATTTAGTTATGGCATTTTGTTGTTGGAGATCATCAGTGGAAAAAGAAGCCGAGGTTTCTGTCATTCGAGTGACCAAAATCTTATTGCATATGCATGGCGACTGTGGAAAGAAGGAAATCCAGAAGAATTAATCGACGACGCCATTCGCGAAACGTGCACCCTTTCAGAGGTATTGAGATGTATCAATATAAGTTTATTGTGTGTTCAACAACATTCCAATGATCGACCCACAATGTCATCGGTGGTTATGATGTTAGGCTGTGAAATTCCTTTGTCACAACCAAAACAGCCAGGATTTTTCATAGAAAATGAAGTCATTGCAATGAAGAATGAGTCGAGTAAAGATAAATCAACTTCAAATAATGAATTAACTATTACACTCCCAGATCCCAGGTAA 2460 41.26 MDSFSSTLLVFNFNLVFFLFRSAAATDSLTAQNPFLRDGLTLVSRNGNFELGFFSPGLSTDRYLGIWFKNRRGPTSVWVANRKTPINDSSGVLVMNITTGNLTLYSHNSTAVAWSARLLRKVPNGVLQLLDTGNLVLRNGEDENPQNYSWQSFDYPTDTLLPGMKLGWDLRHNIDRRLDAWKNPNDPAPGNLSWRMELHEYPESVMWKGSQEYFRHGPWNGVRVTSRPLGIAPILNFNFVSNEDEVYYQYSVVNKSHTVMVVMNQSNYMRIMYLWSAAERQWRLYTSLPRDFCDNYALCGPYGYCDIRVTPSCKCLEGFKPRSPDSWKAGEFADGCERNKLMNCGDEVGFAQFNQLKLPDTKYTWVNKSMNLEECKQKCLRNCSCMAYANTNISGSGSGCALWIGDLIDLKLIPDAGQDLYVRMLASELVKHGEAHKTEGLNPKVKIALVVIAAGFVLAILFICLYIFKKRSTFKDDHEKIEAEELELPLFDLSLINSATNNFSLNNKLGEGGFGPVYKGKLTNGQDIAVKRLSQSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLIYEYMPNKSLDFFIFDRTQRQLLDWSKRYHIICGIARGLVYLHQDSRLRIIHRDLKPSNVLLDMDMNPKISDFGLAKTCGGDQTEGRTIRVVGTYGYMAPEYAFDGQFSVKSDAFSYGILLLEIISGKRSRGFCHSSDQNLIAYAWRLWKEGNPEELIDDAIRETCTLSEVLRCINISLLCVQQHSNDRPTMSSVVMMLGCEIPLSQPKQPGFFIENEVIAMKNESSKDKSTSNNELTITLPDPR 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16430635 16434240 + Tan0017664.1 Tan01g1622 739046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1622 819 Pfam PAN-like domain 345 410 IPR003609 -
Tan01g1622 819 SMART ntp_6 345 424 IPR003609 -
Tan01g1622 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 153 - -
Tan01g1622 819 CDD PAN_AP_plant 342 423 - -
Tan01g1622 819 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Tan01g1622 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Tan01g1622 819 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544(InterPro)
Tan01g1622 819 Gene3D Hepatocyte Growth Factor 341 420 - -
Tan01g1622 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 787 - -
Tan01g1622 819 PIRSF SRK 1 819 IPR024171 GO:0004674(InterPro)
Tan01g1622 819 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Tan01g1622 819 Pfam D-mannose binding lectin 75 182 IPR001480 -
Tan01g1622 819 Pfam Protein tyrosine and serine/threonine kinase 504 772 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1622 819 MobiDBLite consensus disorder prediction 799 819 - -
Tan01g1622 819 MobiDBLite consensus disorder prediction 800 819 - -
Tan01g1622 819 Gene3D - 22 153 IPR036426 -
Tan01g1622 819 CDD STKc_IRAK 509 773 - -
Tan01g1622 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 781 - -
Tan01g1622 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Tan01g1622 819 CDD B_lectin 36 156 IPR001480 -
Tan01g1622 819 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Tan01g1622 819 ProSiteProfiles Protein kinase domain profile. 503 787 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1622 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1622 819 SMART blect_4 33 156 IPR001480 -
Tan01g1622 819 SUPERFAMILY Protein kinase-like (PK-like) 488 773 IPR011009 -
Tan01g1622 819 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Tan01g1622 819 SMART serkin_6 503 766 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1619 Tan-Chr1:16422674 Tan01g1622 Tan-Chr1:16430635 0.00E+00 dispersed
Tan01g1620 Tan-Chr1:16422674 Tan01g1622 Tan-Chr1:16430635 0.00E+00 dispersed
Tan01g1622 Tan-Chr1:16430635 Tan01g4474 Tan-Chr1:110203536 1.70E-276 dispersed
Tan01g1621 Tan-Chr1:16430463 Tan01g1622 Tan-Chr1:16430635 0.00E+00 tandem
Tan01g1622 Tan-Chr1:16430635 Tan01g1623 Tan-Chr1:16430635 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67042 PF07714 PK_Tyr_Ser-Thr 2.70E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1622 - - - 0.0