Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1623 ATGGACTCTTTCTCTTCAACACTCCTTGTCTTTAACTTTAACTTGGTCTTTTTCCTCTTCAGGTCTGCAGCTGCCACTGATTCCTTAACGGCTCAAAACCCATTTCTCCGAGATGGGCTTACTCTGGTCTCCAGAAATGGAAATTTCGAATTGGGTTTCTTCAGTCCTGGTCTTTCAACCGACCGTTACTTGGGAATTTGGTTCAAGAATCGGCGAGGTCCGACCTCCGTTTGGGTTGCGAACAGGAAAACACCCATTAATGATTCGTCTGGTGTACTGGTGATGAACATCACAACAGGAAATCTTACACTCTATAGCCACAATTCCACCGCCGTTGCTTGGTCCGCTAGGTTACTGAGAAAAGTTCCCAATGGGGTACTCCAGCTATTGGACACTGGAAATCTTGTGCTGAGAAATGGGGAAGATGAAAATCCCCAAAACTACTCCTGGCAAAGCTTTGATTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTGGGTTGGGATTTGAGGCATAACATTGATAGAAGATTAGACGCTTGGAAGAATCCCAATGACCCAGCTCCTGGAAACCTCAGTTGGAGGATGGAGCTTCATGAATATCCTGAGTCTGTGATGTGGAAAGGTTCCCAAGAATACTTCAGGCATGGCCCATGGAATGGTGTGAGAGTCACTAGTAGACCACTAGGCATAGCGCCAATTCTGAACTTCAACTTTGTTTCAAATGAGGATGAGGTTTACTACCAATACTCTGTTGTTAATAAGTCTCATACCGTGATGGTGGTAATGAACCAATCCAATTACATGCGCATAATGTACTTGTGGTCTGCAGCTGAGAGACAGTGGAGACTTTACACTTCATTACCAAGAGATTTCTGTGACAATTATGCCCTGTGTGGCCCCTATGGATATTGCGATATAAGGGTCACTCCATCTTGTAAATGTCTAGAAGGGTTTAAGCCAAGATCACCTGATAGTTGGAAGGCAGGGGAATTTGCGGACGGTTGTGAACGGAACAAACTGATGAATTGTGGTGATGAAGTTGGGTTTGCACAGTTCAACCAGCTGAAATTGCCAGATACAAAGTATACTTGGGTCAACAAAAGCATGAATCTTGAAGAATGCAAGCAAAAATGCTTGAGAAATTGTTCTTGTATGGCTTATGCTAATACTAATATCAGTGGCAGTGGCAGTGGCTGTGCCTTATGGATTGGTGATCTAATTGACTTGAAATTGATCCCGGACGCAGGACAGGATTTATATGTCAGGATGCTTGCCTCAGAATTAGTCAAGCATGGAGAGGCACACAAAACTGAAGGATTGAATCCGAAGGTGAAGATTGCTTTGGTTGTGATTGCCGCCGGTTTTGTTTTGGCTATCCTCTTCATATGCTTATACATTTTCAAAAAGAGATCAACCTTCAAAGATGACCATGAGAAAATAGAAGCTGAAGAGCTGGAGCTTCCCTTGTTTGATCTATCCTTAATAAATAGTGCCACGAATAACTTCTCACTTAATAATAAGCTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATATTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAGGGAATGAATGAATTTAAGAACGAAGTAATCCTAATTGCAAAACTTCAACATCGAAATCTCGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGACGAGAAAATGCTAATTTACGAGTATATGCCGAACAAAAGTCTGGACTTCTTTATATTTGATCGAACACAACGTCAATTACTAGACTGGTCGAAACGGTATCACATTATTTGTGGAATTGCTAGAGGACTCGTGTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATTTAAAACCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTAGCTAAAACTTGCGGTGGGGATCAAACTGAAGGACGGACAATAAGAGTGGTTGGAACTTAG 2007 41.95 MDSFSSTLLVFNFNLVFFLFRSAAATDSLTAQNPFLRDGLTLVSRNGNFELGFFSPGLSTDRYLGIWFKNRRGPTSVWVANRKTPINDSSGVLVMNITTGNLTLYSHNSTAVAWSARLLRKVPNGVLQLLDTGNLVLRNGEDENPQNYSWQSFDYPTDTLLPGMKLGWDLRHNIDRRLDAWKNPNDPAPGNLSWRMELHEYPESVMWKGSQEYFRHGPWNGVRVTSRPLGIAPILNFNFVSNEDEVYYQYSVVNKSHTVMVVMNQSNYMRIMYLWSAAERQWRLYTSLPRDFCDNYALCGPYGYCDIRVTPSCKCLEGFKPRSPDSWKAGEFADGCERNKLMNCGDEVGFAQFNQLKLPDTKYTWVNKSMNLEECKQKCLRNCSCMAYANTNISGSGSGCALWIGDLIDLKLIPDAGQDLYVRMLASELVKHGEAHKTEGLNPKVKIALVVIAAGFVLAILFICLYIFKKRSTFKDDHEKIEAEELELPLFDLSLINSATNNFSLNNKLGEGGFGPVYKGKLTNGQDIAVKRLSQSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLIYEYMPNKSLDFFIFDRTQRQLLDWSKRYHIICGIARGLVYLHQDSRLRIIHRDLKPSNVLLDMDMNPKISDFGLAKTCGGDQTEGRTIRVVGT 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16430635 16434240 + Tan0017664.3 Tan01g1623 739047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1623 668 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Tan01g1623 668 SMART ntp_6 345 424 IPR003609 -
Tan01g1623 668 Gene3D Transferase(Phosphotransferase) domain 1 579 668 - -
Tan01g1623 668 CDD PAN_AP_plant 342 423 - -
Tan01g1623 668 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 668 - -
Tan01g1623 668 Pfam PAN-like domain 345 410 IPR003609 -
Tan01g1623 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 579 668 - -
Tan01g1623 668 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Tan01g1623 668 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Tan01g1623 668 Pfam D-mannose binding lectin 75 182 IPR001480 -
Tan01g1623 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Tan01g1623 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 153 - -
Tan01g1623 668 Gene3D - 22 153 IPR036426 -
Tan01g1623 668 Gene3D Hepatocyte Growth Factor 341 420 - -
Tan01g1623 668 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544(InterPro)
Tan01g1623 668 ProSiteProfiles Protein kinase domain profile. 503 668 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1623 668 CDD B_lectin 36 156 IPR001480 -
Tan01g1623 668 SUPERFAMILY Protein kinase-like (PK-like) 486 668 IPR011009 -
Tan01g1623 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1623 668 SMART blect_4 33 156 IPR001480 -
Tan01g1623 668 Pfam Protein tyrosine and serine/threonine kinase 504 656 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1623 668 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Tan01g1623 668 SMART serkin_6 503 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1621 Tan-Chr1:16430463 Tan01g1623 Tan-Chr1:16430635 0.00E+00 dispersed
Tan01g1623 Tan-Chr1:16430635 Tan01g4474 Tan-Chr1:110203536 5.60E-222 dispersed
Tan01g1622 Tan-Chr1:16430635 Tan01g1623 Tan-Chr1:16430635 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67043 PF00069 Pkinase 3.10E-33 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1623 - - - 0.0