Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1649 | ATGGCGGAGGAGTTTCAGAGCACTGGGAACTGGTGGGATGCTTCTAGAACCCGCTACGAAGCCGGAATATCCCCTTCCTCCTCCTCCATCACCACTTTCGTCGACCACTCCGACTCCGCCGCCGCCGCCGGTGACCCCAATTTGCACATCATGGGCTTGGGCCTCGATTGGAACCAACCCCTCTTTCGGGGCGGCGGAGAGAAGGCAGCGGAGAGCAGTTTCCGATCGATGCTGCAGCCGGATAATATGAATTTGAATATGCAAGAAACAGGGCAACACCACCACCAACAACAACAACAGATTCAATGGATGAGATCGGAGAAGCTATACTCAGGGGAGTCTCCGGCGACCGAATTCAAACCATTAAACAGAGGGTTTTCGTTAGATCATCAGAATCAGCCTCAGCCGCAGTTCAGCCCTTCTCAGTACAGCTCTGGCGACAGCGCCGTCACCAGTTTTCCAATCGACACCACCGCCGCCACTTTGTACGGAAATTCCGCAACATTATTACAAGGCTTATTAGCCGGCGGCGGCGGAGGCGAGCAACAACAAGGTTCGGGCGCGGGAATGAACTTCCCTTACAGTGCCCATTTCGGGATGAACTCCGGCGAGTTAATGACGGCGGCGTCGTGGTCGACCTCTAAAGTACCTCAGTTCTTAAGAAACTCGCCACCAAAAGGAGCGGCGCCGGCGCCACCCCACAGTCAGTTACAGTTTTCTAACAACACGGCGTTCTGGAACGCGTCGGATATGAAAGACGTGAGGCCGAGTTATTTTCCGCCGTCGTATAACGCCGCAGCTTTCGCCGATAAATCAAAGAATATATCAGAGGTTCGTGATTCGGGAACAGTGGGTAAAAAAAGTGGAAATGATCATAATCAACAATCCGCCGCTGCTGCGGCTAAAAGGCCTCGAAATGAAACTCCTTCCCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCTTCAGTGCTGTCTGAAGCCATTGAATACATAAAGTTCCTCCATGACCAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTCCAGTACAGCAGCAACATCAACAGCAGAGGTGTGAGAAAACGAAGGATGGAGAAGGAGGAAAACAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAACTACTTTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACCTTCAGATAA | 1290 | 50.93 | MAEEFQSTGNWWDASRTRYEAGISPSSSSITTFVDHSDSAAAAGDPNLHIMGLGLDWNQPLFRGGGEKAAESSFRSMLQPDNMNLNMQETGQHHHQQQQQIQWMRSEKLYSGESPATEFKPLNRGFSLDHQNQPQPQFSPSQYSSGDSAVTSFPIDTTAATLYGNSATLLQGLLAGGGGGEQQQGSGAGMNFPYSAHFGMNSGELMTAASWSTSKVPQFLRNSPPKGAAPAPPHSQLQFSNNTAFWNASDMKDVRPSYFPPSYNAAAFADKSKNISEVRDSGTVGKKSGNDHNQQSAAAAAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHDQVSVLSTPYLKSGAPVQQQHQQQRCEKTKDGEGGKQDLRSRGLCLVPVSTTFPVTHETTVDFWTPTFGGTFR | 429 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 17283299 | 17287787 | + | Tan0015546.1 | Tan01g1649 | 739073 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1649 | 429 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 306 | 355 | IPR011598 | GO:0046983(InterPro) | |
Tan01g1649 | 429 | MobiDBLite | consensus disorder prediction | 114 | 149 | - | - | |
Tan01g1649 | 429 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 316 | 371 | IPR036638 | GO:0046983(InterPro) | |
Tan01g1649 | 429 | MobiDBLite | consensus disorder prediction | 279 | 312 | - | - | |
Tan01g1649 | 429 | FunFam | Transcription factor bHLH123 family | 316 | 380 | - | - | |
Tan01g1649 | 429 | SMART | finulus | 317 | 361 | IPR011598 | GO:0046983(InterPro) | |
Tan01g1649 | 429 | CDD | bHLH_AtbHLH_like | 312 | 363 | IPR045239 | - | |
Tan01g1649 | 429 | MobiDBLite | consensus disorder prediction | 380 | 394 | - | - | |
Tan01g1649 | 429 | MobiDBLite | consensus disorder prediction | 371 | 394 | - | - | |
Tan01g1649 | 429 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 92 | 406 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Tan01g1649 | 429 | MobiDBLite | consensus disorder prediction | 279 | 301 | - | - | |
Tan01g1649 | 429 | Gene3D | - | 316 | 385 | IPR036638 | GO:0046983(InterPro) | |
Tan01g1649 | 429 | MobiDBLite | consensus disorder prediction | 126 | 149 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1649 | Tan-Chr1:17283299 | Tan01g1651 | Tan-Chr1:17283299 | 1.00E-197 | dispersed | |
Tan01g1649 | Tan-Chr1:17283299 | Tan01g1650 | Tan-Chr1:17283299 | 9.20E-194 | tandem | |
Tan06g1531 | Tan-Chr6:22124963 | Tan01g1649 | Tan-Chr1:17283299 | 3.00E-15 | transposed | |
Tan01g1649 | Tan-Chr1:17283299 | Tan05g3182 | Tan-Chr5:83865952 | 4.30E-42 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1649 | - | - | - | 0.0 |