Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1649 ATGGCGGAGGAGTTTCAGAGCACTGGGAACTGGTGGGATGCTTCTAGAACCCGCTACGAAGCCGGAATATCCCCTTCCTCCTCCTCCATCACCACTTTCGTCGACCACTCCGACTCCGCCGCCGCCGCCGGTGACCCCAATTTGCACATCATGGGCTTGGGCCTCGATTGGAACCAACCCCTCTTTCGGGGCGGCGGAGAGAAGGCAGCGGAGAGCAGTTTCCGATCGATGCTGCAGCCGGATAATATGAATTTGAATATGCAAGAAACAGGGCAACACCACCACCAACAACAACAACAGATTCAATGGATGAGATCGGAGAAGCTATACTCAGGGGAGTCTCCGGCGACCGAATTCAAACCATTAAACAGAGGGTTTTCGTTAGATCATCAGAATCAGCCTCAGCCGCAGTTCAGCCCTTCTCAGTACAGCTCTGGCGACAGCGCCGTCACCAGTTTTCCAATCGACACCACCGCCGCCACTTTGTACGGAAATTCCGCAACATTATTACAAGGCTTATTAGCCGGCGGCGGCGGAGGCGAGCAACAACAAGGTTCGGGCGCGGGAATGAACTTCCCTTACAGTGCCCATTTCGGGATGAACTCCGGCGAGTTAATGACGGCGGCGTCGTGGTCGACCTCTAAAGTACCTCAGTTCTTAAGAAACTCGCCACCAAAAGGAGCGGCGCCGGCGCCACCCCACAGTCAGTTACAGTTTTCTAACAACACGGCGTTCTGGAACGCGTCGGATATGAAAGACGTGAGGCCGAGTTATTTTCCGCCGTCGTATAACGCCGCAGCTTTCGCCGATAAATCAAAGAATATATCAGAGGTTCGTGATTCGGGAACAGTGGGTAAAAAAAGTGGAAATGATCATAATCAACAATCCGCCGCTGCTGCGGCTAAAAGGCCTCGAAATGAAACTCCTTCCCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCTTCAGTGCTGTCTGAAGCCATTGAATACATAAAGTTCCTCCATGACCAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTCCAGTACAGCAGCAACATCAACAGCAGAGGTGTGAGAAAACGAAGGATGGAGAAGGAGGAAAACAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAACTACTTTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACCTTCAGATAA 1290 50.93 MAEEFQSTGNWWDASRTRYEAGISPSSSSITTFVDHSDSAAAAGDPNLHIMGLGLDWNQPLFRGGGEKAAESSFRSMLQPDNMNLNMQETGQHHHQQQQQIQWMRSEKLYSGESPATEFKPLNRGFSLDHQNQPQPQFSPSQYSSGDSAVTSFPIDTTAATLYGNSATLLQGLLAGGGGGEQQQGSGAGMNFPYSAHFGMNSGELMTAASWSTSKVPQFLRNSPPKGAAPAPPHSQLQFSNNTAFWNASDMKDVRPSYFPPSYNAAAFADKSKNISEVRDSGTVGKKSGNDHNQQSAAAAAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHDQVSVLSTPYLKSGAPVQQQHQQQRCEKTKDGEGGKQDLRSRGLCLVPVSTTFPVTHETTVDFWTPTFGGTFR 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17283299 17287787 + Tan0015546.1 Tan01g1649 739073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1649 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 306 355 IPR011598 GO:0046983(InterPro)
Tan01g1649 429 MobiDBLite consensus disorder prediction 114 149 - -
Tan01g1649 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 316 371 IPR036638 GO:0046983(InterPro)
Tan01g1649 429 MobiDBLite consensus disorder prediction 279 312 - -
Tan01g1649 429 FunFam Transcription factor bHLH123 family 316 380 - -
Tan01g1649 429 SMART finulus 317 361 IPR011598 GO:0046983(InterPro)
Tan01g1649 429 CDD bHLH_AtbHLH_like 312 363 IPR045239 -
Tan01g1649 429 MobiDBLite consensus disorder prediction 380 394 - -
Tan01g1649 429 MobiDBLite consensus disorder prediction 371 394 - -
Tan01g1649 429 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 92 406 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Tan01g1649 429 MobiDBLite consensus disorder prediction 279 301 - -
Tan01g1649 429 Gene3D - 316 385 IPR036638 GO:0046983(InterPro)
Tan01g1649 429 MobiDBLite consensus disorder prediction 126 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1649 Tan-Chr1:17283299 Tan01g1651 Tan-Chr1:17283299 1.00E-197 dispersed
Tan01g1649 Tan-Chr1:17283299 Tan01g1650 Tan-Chr1:17283299 9.20E-194 tandem
Tan06g1531 Tan-Chr6:22124963 Tan01g1649 Tan-Chr1:17283299 3.00E-15 transposed
Tan01g1649 Tan-Chr1:17283299 Tan05g3182 Tan-Chr5:83865952 4.30E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1649 - - - 0.0