Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1680 ATGCAATTGCCAATGCTCTATCCCAGAGATTTCATCTCCGTTTCCCTTCTTATTTCCCTTCTTGTTTTTTCCAATTTTTCTCTCTGTTCCGCACAAGACTACATCATCGGCGACCCCGGCGACGACGACGACGACGCCAAGGCGAAGCCGGCCGCCCCACCGCCGGAGCAGAATGACTGCAATGGCATATTCTTGTCCTACACTTTCATTTCCCGTGAGAAGGAGCTGCCCCGGCTGAAGAATGCCACCGCTCAGTCTTGGGCCTTCAAATCGGAGGCGATGATTCTGAACGCCGGTGCGACGGAGCTCAAGGCCTGGAAGATGTTCATCGGGTTTCACCACCAGGAGATTCTCGTCTCGGCGGCCGGCGCCGTCGTGATGGACGGCTCGGATTTCCCTGTGGACGTTGGAAATGGAACCACTTTGGCTGGGTATCCGATGACCGATCTGAAAACGTCCATTGAAACCGCCGGAGATATCAATCAGATTCAGGCGACGGTTGAGCTGACCGGAACGCAGTTCGGCATCAAGCCGCCTGGTGTTCCGATGCCTAAGACGATTCGCCTTGTTAACGATGGATTTAAGTGCCCTGCGCCTCGTCATCGTGGCAAAAGATCAATGCATGTATGCTGCAAAAAAGATCCAAAGTTCAAGGTGAAAGAACCAAAGAAAACCAAGTTTATGGCTCGGCAAAATGGAGATCTGTCACTGACCTATGATGTAATGCAAGCTTTTGGAAACAACTATCTTGCTCAAGTTACAATCGACAACAACAATCCGCTCGGCCGACTCGATCACTGGAACTTAACCTGGGAATGGATGAGAGGAGAGTTCATTCAAAGCATGAGAGGAGCATACACTCACACAAGAGACTTATCTCAATGCATCTACGGTCCCGCAGGCCAATACTATCAAGATTTCGACTTCACCGGGGTCATGAGTTGTGATAAGAGGCCGGTGATCGCAGATCTACCAGCGAATCGAAAGGACGATGATAAGGTCGGGAAATTGCCATATTGTTGTAGGAATGGAAGCTTGTTGCCAACAATGATGGATGAGAGCAAAGCAAGGTCTATTTTTCAACTACAAGTCTATAAGCTTCCACCAGACATGAACCGAACGGCTCTTAATCCACCACAGAAATGGAAGATCTCAGGTATCCTGAACCCGAAATACGTATGTGGGGCTCCGATCCGAGTAGCACCGACAGAGTTTCCAGACTCGAGCGGGCTTCAGGCAACGAGTACGGCCATTGCAAGTTGGCAAGTTGTGTGCAACATTACAAGACCAAAGGTGAAGCAATCAAAATGTTGTGTTTCATTTTCAGCATATTATAATGATTCTGTAATTCCTTGCAATACTTGTGCGTGTGGGTGTGAAGACAGTGAGAATATTGATACTGATACTTGCAATCCAAATGCACATCCAATGCTGCTCCCTCCAGAAGCCCTTTTGGTTCCATTTGATAACAGGACAGCAAAGGCAAGAGCTTGGGCTAAAATTAAACACTACCCAATTCCAAAGAAGATGCCTTGTCCTGATAACTGTGGAGTTAGCCTCAATTGGCATATTAACTCTGACTATACCAGTGGATGGACTGCAAGATTAACACTCTTCAACTGGCAAGATTATCCATTTGAAGATTGGTTTACTGCTATTCAGTTGAACAAGGCCGGTCGCGGTTACGAAAACGTTTATTCCTTCAACGGAACCAACCTTCCCAACCTCAAAAATACCATCTTCCTCCAAGGCTTGCCTGGTTTAACATACTTGATGGGAGAGGTTAATGGAACCAATCCTGCTTACGATCCAAGAGTTCCAGGAAAGCAGCAATCCGTCATTTCTTTTACGAAGAAGGGCCTGCGCGACATCGACATTCAACGAGGCGATGGTTTCCCAATCAAAGTATTTTTCAATGGCGAAGAATGTGCACTTCCAAAGCAAATTCCCATTGCAAATTCTGCCCACCGCGCTCCCCACGCTTTCCTGCCCCTCACCTTCATCGTAGCCATTGCTTTCGCGCTTATAACAGATCGCTTCCTTTGA 2046 47.7 MQLPMLYPRDFISVSLLISLLVFSNFSLCSAQDYIIGDPGDDDDDAKAKPAAPPPEQNDCNGIFLSYTFISREKELPRLKNATAQSWAFKSEAMILNAGATELKAWKMFIGFHHQEILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLVNDGFKCPAPRHRGKRSMHVCCKKDPKFKVKEPKKTKFMARQNGDLSLTYDVMQAFGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLSQCIYGPAGQYYQDFDFTGVMSCDKRPVIADLPANRKDDDKVGKLPYCCRNGSLLPTMMDESKARSIFQLQVYKLPPDMNRTALNPPQKWKISGILNPKYVCGAPIRVAPTEFPDSSGLQATSTAIASWQVVCNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCEDSENIDTDTCNPNAHPMLLPPEALLVPFDNRTAKARAWAKIKHYPIPKKMPCPDNCGVSLNWHINSDYTSGWTARLTLFNWQDYPFEDWFTAIQLNKAGRGYENVYSFNGTNLPNLKNTIFLQGLPGLTYLMGEVNGTNPAYDPRVPGKQQSVISFTKKGLRDIDIQRGDGFPIKVFFNGEECALPKQIPIANSAHRAPHAFLPLTFIVAIAFALITDRFL 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17872977 17875122 + Tan0002426.1 Tan01g1680 739104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1680 681 PANTHER COBRA-LIKE PROTEIN 7 15 675 - -
Tan01g1680 681 Pfam COBRA-like protein 249 428 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1680 Tan-Chr1:17872977 Tan01g4517 Tan-Chr1:110815503 4.40E-299 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1680 - - - 0.0