Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1685 ATGATCTCTTCTTTGAGTCAATCTGCAAAATCCATTAATGGGTCGGACGTTGTTCTCCGGCAGAGGTCTCCGGCGCCAGTCCGGCGGGTTTCGTGTCCACCGCCATTGCCGGTGCAAAAGCCCCAAGGCTCTGTAGTGGGTATGAAAAATGCTCTTCATATCTCTTCGGTTTCGAATTTTTTTGGGCCACTGGGAACTCGGAAGAGTGATTTGATTACGAGTAAAGCCTACGAGGCTGACCGATCGCAGCCGATCGAGTCGAACATTGAACTGACGGTGGCCGAAGCGCCGTCGGAGGCGGCAAAGAAGGTGAAGATCGGGCTGTATTTCGCTCTCTGGTGGGGTTTGAATGTCGTGTTCAACATTTACAACAAGAAGGTTTTGAATGCGTATCCATATCCATGGCTGACCTCCACACTTTCTCTTGCTGTTGGGTCTCTCATTATGTTAGTCTCTTGGATGACGAGGATCGCCGAGGCACCCAAGACCGATTTCGAGTTCTGGAAATCTTTGCTCCCTGTTGCTGTGGCCCATACGATTGGACATGTAGCGGCAACCGTGAGCATGTCAAAGGTTGCTGTCTCGTTCACTCATATAATCAAGAGTGGTGAGCCTGCATTTAGCGTATTGGTTTCAAGGTTCCTGTTGGGTGAGACTTTTCCTGTTCCTGTCTACCTCTCGCTTCTCCCGATCATTGGTGGCTGTGCGCTTGCTGCCGTGACTGAGCTCAACTTCAACATGACTGGTTTCATGGGAGCCATGATATCAAACTTGGCATTTGTCTTCAGAAACATATTCTCCAAGAAAGGCATGAAGGGGAAGTCTGTTAGTGGAATGAACTACTACGCCTGTTTGTCCATATTGTCTCTTTTGATTCTTACCCCGTTCGCCATTGCTGTCGAAGGACCGCAGATGTGGGCTGCTGGTTGGAAAACAGCTCTCTCTGAGATCGGACCTAATTTCGTATGGTGGGTAGCAGCACAGAGTGTGTTCTATCATCTCTACAACCAAGTATCCTACATGTCACTGGACGAGATTTCTCCCTTGACATTCAGCATTGGTAACACCATGAAACGTATATCCGTCATAGTTTCTGCAATCATCATCTTTCGCACGCCTGTCCAGCCCGTCAATGCTCTCGGAGCTGCGATCGCCGTTCTCGGGACCTTTTTGTACTCCCAGGCAAAACAATGA 1194 49.16 MISSLSQSAKSINGSDVVLRQRSPAPVRRVSCPPPLPVQKPQGSVVGMKNALHISSVSNFFGPLGTRKSDLITSKAYEADRSQPIESNIELTVAEAPSEAAKKVKIGLYFALWWGLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPKTDFEFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQMWAAGWKTALSEIGPNFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPVQPVNALGAAIAVLGTFLYSQAKQ 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17939823 17943712 + Tan0008530.1 Tan01g1685 739109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1685 397 PANTHER SOLUTE CARRIER FAMILY 35 100 396 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Tan01g1685 397 Pfam Triose-phosphate Transporter family 105 393 IPR004853 -
Tan01g1685 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 396 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan01g1685 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1685 Tan-Chr1:17939823 Tan01g4525 Tan-Chr1:110984590 2.60E-182 dispersed
Tan01g1685 Tan-Chr1:17939823 Tan01g1686 Tan-Chr1:17939823 1.20E-219 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1685 K15283 - csv:101216838 719.539