Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1692 ATGAATTGCTTTAAATGTTGTATGTCCGAGGAAAAAGTCAGTAGGAAGTCTTTGAAAAAGAGCATTAAGGAGTATCAAGACACAAAAACATTAGCTTCATTTGCCAACATTTCCTTTAAATCTGATAGCAGTCGGCGAAGGTACATAACTGAGGAGATAAAGAAGTTAGGAAAAGGAAACATCACAGCTCAAACTTTTACATTTAATGATCTAAGTACTGCTACAAATAACTTCAATCACGAAAATCTTTTGGGAGAAGGTGGTTTTGGAAGGGTTTACAAAGGCATCATTGAAGGCACAAAGCAGGTAACAGCCGTGAAGCAACTTGACCGAAATGGATTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTGAATTTGGTTGGGTATTGTGCTGATGGGGATCAGAGGATTTTGGTTTATGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTACTCGATATAGCATCAGACAAGCCGTCTCTGGACTGGAAGACGAGGATGAAAATTGCTGAAGGAGCAGCGAAAGGGCTTGAGTACTTACATGAAACCGCCAATCCTCCTGTGATATATCGCGATTTCAAAGCTTCAAACATATTGTTGGATGAGGAATTCAATCCAAAGCTCTCTGATTTTGGTCTCGCAAAGTTAGGTCCTACTGGAGATAAATCTCATGTTTCCACTAGAGTGATGGGAACCTATGGTTACTGTGCTCCAGAATATGCATTGACAGGACAATTGACAACAAAATCAGATGTCTACAGTTTCGGCGTCGTGTTTCTGGAGATTATAACTGGAAGAAGAGTTATAGACAATGCAAGACCAACAGCAGAACAAAATTTAATTACATGGGCACAACCACTTTTCAAAGACAGAAGGAAATTTACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTCTGTATCAAGCTCTGGCAGTGGCAGCCATGTGTTTACAAGAGGAAGCGAATACACGGCCATTGATCAGCGACGTGGTTACAGCTCTTGAATATTTAGCTGCAAACAAGGATATCGATGCAGATGGAGAAGAAGAATCGGCTTCGGGATCGGTATCGGGATCAGGTTCAGGTTCAGCTTCTCCTGATAGAAGTAGTGATAATGGAGATAAAAAAGTTGATGTTGAGGGTGATGGGAGGTGA 1209 41.19 MNCFKCCMSEEKVSRKSLKKSIKEYQDTKTLASFANISFKSDSSRRRYITEEIKKLGKGNITAQTFTFNDLSTATNNFNHENLLGEGGFGRVYKGIIEGTKQVTAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEYMAKGSLEDHLLDIASDKPSLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVAAMCLQEEANTRPLISDVVTALEYLAANKDIDADGEEESASGSVSGSGSGSASPDRSSDNGDKKVDVEGDGR 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17992777 17995412 - Tan0009219.1 Tan01g1692 739116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1692 402 Gene3D Transferase(Phosphotransferase) domain 1 155 375 - -
Tan01g1692 402 FunFam Serine/threonine-protein kinase PBS1 155 370 - -
Tan01g1692 402 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1692 402 MobiDBLite consensus disorder prediction 387 402 - -
Tan01g1692 402 PANTHER OS07G0668900 PROTEIN 30 366 - -
Tan01g1692 402 CDD STKc_IRAK 84 353 - -
Tan01g1692 402 MobiDBLite consensus disorder prediction 362 402 - -
Tan01g1692 402 MobiDBLite consensus disorder prediction 370 386 - -
Tan01g1692 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g1692 402 SUPERFAMILY Protein kinase-like (PK-like) 62 354 IPR011009 -
Tan01g1692 402 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524(InterPro)
Tan01g1692 402 Gene3D Phosphorylase Kinase; domain 1 37 154 - -
Tan01g1692 402 FunFam probable serine/threonine-protein kinase RLCKVII 50 154 - -
Tan01g1692 402 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1692 Tan-Chr1:17992777 Tan01g2955 Tan-Chr1:68148626 1.40E-183 dispersed
Tan01g1692 Tan-Chr1:17992777 Tan04g0375 Tan-Chr4:3103382 9.40E-132 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67046 PF00069 Pkinase 6.80E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1692 - - - 0.0