Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1777 | ATGGCACCTTCTGATTTATGGATAAAGGAATATAATGATGCCTCTAAACTTGGTGATGATATCAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGAAGCCCAACGTCATACCTCTGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCCTACAGTCTCTTTTGTTGAAGCTTCCTGTAAAGCAGCCCCTGTCTGAAAAAGAGATAAATCGACGTAAAGACATGCTTGTACAAATGAGATCAAAAGTAAACCAGATGGCCTCAACGCTGAACATATCGAACTTTGCTAACCGTGACAGTTTGCTCGGCCCAGATATGAAATCGGCAGATGTGATGAGCAAAACGGTTGGACTAGACAATCAAGGACTCGTTGGTTTTCAAAGACAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGCTGGAGGAGACAATTACAAGTACAAAACATATTGCATTAGCAGTTAATCAAGAACTCGATCTTCATGCTCGCCTAATTGATGACTTGGACCAACACGTTGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGCTATATTGAACAAGCGAGCAAAGGGGAGCTGCTCGTGCATGGGGATGCTTCTGTCTGTGGTTGGTATTGTGGTTCTCATTGCTGTAATATGGCTACTCATTCAATATTTGTAA | 699 | 42.49 | MAPSDLWIKEYNDASKLGDDINGMISERSSFPATGPEAQRHTSAIRRKITILGTKVDGLQSLLLKLPVKQPLSEKEINRRKDMLVQMRSKVNQMASTLNISNFANRDSLLGPDMKSADVMSKTVGLDNQGLVGFQRQIMKEQDEGLEKLEETITSTKHIALAVNQELDLHARLIDDLDQHVDVTDSRLARVQKRLAILNKRAKGSCSCMGMLLSVVGIVVLIAVIWLLIQYL | 232 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 19015234 | 19018512 | - | Tan0009452.2 | Tan01g1777 | 739201 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1777 | 232 | PANTHER | SYNTAXIN | 8 | 218 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Tan01g1777 | 232 | SUPERFAMILY | SNARE fusion complex | 127 | 198 | - | - | |
Tan01g1777 | 232 | FunFam | syntaxin-51 isoform X2 | 138 | 200 | - | - | |
Tan01g1777 | 232 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 136 | 198 | IPR000727 | - | |
Tan01g1777 | 232 | SMART | tSNARE_6 | 131 | 198 | IPR000727 | - | |
Tan01g1777 | 232 | Pfam | SNARE domain | 173 | 223 | IPR000727 | - | |
Tan01g1777 | 232 | Gene3D | - | 138 | 200 | - | - | |
Tan01g1777 | 232 | CDD | SNARE_Qc | 139 | 196 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1777 | Tan-Chr1:19015234 | Tan01g3132 | Tan-Chr1:84200538 | 6.90E-95 | dispersed | |
Tan01g1776 | Tan-Chr1:19015234 | Tan01g1777 | Tan-Chr1:19015234 | 9.20E-124 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1777 | K08503 | - | csv:101223140 | 399.053 |