Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1795 ATGGGTTTAGAGAGTTTAATTGCAATAAAAGAGCCTCGTTTTGTGGTTCGGAAGTTTCTCGCCAGACCTCAACTTGAAGGCCTTGGCGCTGTTGTAAGACGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCTTTCCTTGTTCTCGATGAGTTTTCTGTTACTGCGCCAGCTGGGTTTCCTGATCATCCGCACAGGGGGTTTGAAACTGTCACCTACATGTTACAGGGAGCAATGAGACATGAAGATTTTAAAGGCAATAAAGGAACAATTGGAGCTGGTGACTTACAATGGATGACTGCAGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCTCATGACACCCAACGTGGCTTACAACTTTGGATCAATCTCTCCTCCAAACACAAAATGATTGAGTCGAGGTATCAAGAAATACGAAGCAAAGACATAGTAGAAGCTACAAAAGATGGAGTGAGAGTGAGAGTGATAGCAGGGGAAGCTTTCGGAGCAAAATCTCCCATTTACACCACAACTCCGACTATGTATTTGGATTTCACTCTCGACCCAAGATCTCGCATTGAGCAGCCGATCCCAATGGGATGGAATGCGTTCGTATACGTGCTAGAAGGCGACGGCGGAGTGTTCGGGAGTTCGAAATCGATGCCCATTGCACCACATCACCTTCTTTTGTTAGGGAATGGTGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTTAGGTTTATATTGGTTGGGGGGCAGCCATTGAATGAGAGTGTGGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAGATTGATCAAACCATTGAGGATTTTGAGAATTGTAAAAATGGCTTTGAGAGAGCAAGGCATTGGAGATCACTATCTTAA 891 45.45 MGLESLIAIKEPRFVVRKFLARPQLEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAMRHEDFKGNKGTIGAGDLQWMTAGKGIVHSEMPASHDTQRGLQLWINLSSKHKMIESRYQEIRSKDIVEATKDGVRVRVIAGEAFGAKSPIYTTTPTMYLDFTLDPRSRIEQPIPMGWNAFVYVLEGDGGVFGSSKSMPIAPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCKNGFERARHWRSLS 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19208511 19211256 + Tan0005741.1 Tan01g1795 739219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1795 296 Gene3D Jelly Rolls 147 254 IPR014710 -
Tan01g1795 296 Pfam Pirin C-terminal cupin domain 178 285 IPR008778 -
Tan01g1795 296 CDD cupin_pirin_N 30 127 - -
Tan01g1795 296 Gene3D Jelly Rolls 26 280 IPR014710 -
Tan01g1795 296 PIRSF Pirin 11 293 IPR012093 -
Tan01g1795 296 PANTHER PIRIN-RELATED 10 294 IPR012093 -
Tan01g1795 296 Pfam Pirin 32 125 IPR003829 -
Tan01g1795 296 SUPERFAMILY RmlC-like cupins 13 294 IPR011051 -
Tan01g1795 296 FunFam pirin 26 162 - -
Tan01g1795 296 CDD cupin_pirin_C 175 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1795 Tan-Chr1:19208511 Tan01g3147 Tan-Chr1:85019506 2.40E-132 dispersed
Tan01g1795 Tan-Chr1:19208511 Tan01g1796 Tan-Chr1:19208511 1.20E-171 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1795 K06911 - csv:101204082 499.204