Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1796 | ATGGGTTTAGAGAGTTTAATTGCAATAAAAGAGCCTCGTTTTGTGGTTCGGAAGTTTCTCGCCAGACCTCAACTTGAAGGCCTTGGCGCTGTTGTAAGACGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCTTTCCTTGTTCTCGATGAGTTTTCTGGTATACTTACTGCGCCAGCTGGGTTTCCTGATCATCCGCACAGGGGGTTTGAAACTGTCACCTACATGTTACAGGGAGCAATGAGACATGAAGATTTTAAAGGCAATAAAGGAACAATTGGAGCTGGTGACTTACAATGGATGACTGCAGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCTCATGACACCCAACGTGGCTTACAACTTTGGATCAATCTCTCCTCCAAACACAAAATGATTGAGTCGAGGTATCAAGAAATACGAAGCAAAGACATAGTAGAAGCTACAAAAGATGGAGTGAGAGTGAGAGTGATAGCAGGGGAAGCTTTCGGAGCAAAATCTCCCATTTACACCACAACTCCGACTATGTATTTGGATTTCACTCTCGACCCAAGATCTCGCATTGAGCAGCCGATCCCAATGGGATGGAATGCGTTCGTATACGTGCTAGAAGGCGACGGCGGAGTGTTCGGGAGTTCGAAATCGATGCCCATTGCACCACATCACCTTCTTTTGTTAGGGAATGGTGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTTAGGTTTATATTGGTTGGGGGGCAGCCATTGAATGAGAGTGTGGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAGATTGATCAAACCATTGAGGATTTTGAGAATTGTAAAAATGGCTTTGAGAGAGCAAGGCATTGGAGATCACTATCTTAA | 897 | 45.37 | MGLESLIAIKEPRFVVRKFLARPQLEGLGAVVRRSIGRFELKYFDPFLVLDEFSGILTAPAGFPDHPHRGFETVTYMLQGAMRHEDFKGNKGTIGAGDLQWMTAGKGIVHSEMPASHDTQRGLQLWINLSSKHKMIESRYQEIRSKDIVEATKDGVRVRVIAGEAFGAKSPIYTTTPTMYLDFTLDPRSRIEQPIPMGWNAFVYVLEGDGGVFGSSKSMPIAPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCKNGFERARHWRSLS | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 19208511 | 19211256 | + | Tan0005741.2 | Tan01g1796 | 739220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1796 | 298 | CDD | cupin_pirin_N | 30 | 129 | - | - | |
Tan01g1796 | 298 | PIRSF | Pirin | 11 | 295 | IPR012093 | - | |
Tan01g1796 | 298 | FunFam | pirin | 26 | 164 | - | - | |
Tan01g1796 | 298 | PANTHER | PIRIN-RELATED | 10 | 296 | IPR012093 | - | |
Tan01g1796 | 298 | Gene3D | Jelly Rolls | 149 | 256 | IPR014710 | - | |
Tan01g1796 | 298 | Pfam | Pirin C-terminal cupin domain | 180 | 287 | IPR008778 | - | |
Tan01g1796 | 298 | Gene3D | Jelly Rolls | 26 | 282 | IPR014710 | - | |
Tan01g1796 | 298 | Pfam | Pirin | 32 | 127 | IPR003829 | - | |
Tan01g1796 | 298 | CDD | cupin_pirin_C | 177 | 255 | - | - | |
Tan01g1796 | 298 | SUPERFAMILY | RmlC-like cupins | 13 | 296 | IPR011051 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1796 | Tan-Chr1:19208511 | Tan01g3147 | Tan-Chr1:85019506 | 2.20E-130 | dispersed | |
Tan01g1795 | Tan-Chr1:19208511 | Tan01g1796 | Tan-Chr1:19208511 | 1.20E-171 | tandem | |
Tan01g1796 | Tan-Chr1:19208511 | Tan01g1797 | Tan-Chr1:19210210 | 9.70E-126 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1796 | K06911 | - | csv:101204082 | 493.041 |