Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g1797 | ATGAGACATGAAGATTTTAAAGGCAATAAAGGAACAATTGGAGCTGGTGACTTACAATGGATGACTGCAGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCTCATGACACCCAACGTGGCTTACAACTTTGGATCAATCTCTCCTCCAAACACAAAATGATTGAGTCGAGGTATCAAGAAATACGAAGCAAAGACATAGTAGAAGCTACAAAAGATGGAGTGAGAGTGAGAGTGATAGCAGGGGAAGCTTTCGGAGCAAAATCTCCCATTTACACCACAACTCCGACTATGTATTTGGATTTCACTCTCGACCCAAGATCTCGCATTGAGCAGCCGATCCCAATGGGATGGAATGCGTTCGTATACGTGCTAGAAGGCGACGGCGGAGTGTTCGGGAGTTCGAAATCGATGCCCATTGCACCACATCACCTTCTTTTGTTAGGGAATGGTGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTTAGGTTTATATTGGTTGGGGGGCAGCCATTGAATGAGAGTGTGGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAGATTGATCAAACCATTGAGGATTTTGAGAATTGTAAAAATGGCTTTGAGAGAGCAAGGCATTGGAGATCACTATCTTAA | 654 | 44.95 | MRHEDFKGNKGTIGAGDLQWMTAGKGIVHSEMPASHDTQRGLQLWINLSSKHKMIESRYQEIRSKDIVEATKDGVRVRVIAGEAFGAKSPIYTTTPTMYLDFTLDPRSRIEQPIPMGWNAFVYVLEGDGGVFGSSKSMPIAPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCKNGFERARHWRSLS | 217 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 19210210 | 19211256 | + | Tan0005741.3 | Tan01g1797 | 739221 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g1797 | 217 | CDD | cupin_pirin_C | 96 | 174 | - | - | |
Tan01g1797 | 217 | Gene3D | Jelly Rolls | 1 | 179 | IPR014710 | - | |
Tan01g1797 | 217 | PIRSF | Pirin | 1 | 214 | IPR012093 | - | |
Tan01g1797 | 217 | Pfam | Pirin C-terminal cupin domain | 99 | 206 | IPR008778 | - | |
Tan01g1797 | 217 | Pfam | Pirin | 1 | 46 | IPR003829 | - | |
Tan01g1797 | 217 | SUPERFAMILY | RmlC-like cupins | 1 | 215 | IPR011051 | - | |
Tan01g1797 | 217 | PANTHER | PIRIN-RELATED | 1 | 215 | IPR012093 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1797 | Tan-Chr1:19210210 | Tan01g3147 | Tan-Chr1:85019506 | 1.00E-92 | dispersed | |
Tan01g1796 | Tan-Chr1:19208511 | Tan01g1797 | Tan-Chr1:19210210 | 9.70E-126 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g1797 | K06911 | - | csv:101204082 | 366.311 |