Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1797 ATGAGACATGAAGATTTTAAAGGCAATAAAGGAACAATTGGAGCTGGTGACTTACAATGGATGACTGCAGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCTCATGACACCCAACGTGGCTTACAACTTTGGATCAATCTCTCCTCCAAACACAAAATGATTGAGTCGAGGTATCAAGAAATACGAAGCAAAGACATAGTAGAAGCTACAAAAGATGGAGTGAGAGTGAGAGTGATAGCAGGGGAAGCTTTCGGAGCAAAATCTCCCATTTACACCACAACTCCGACTATGTATTTGGATTTCACTCTCGACCCAAGATCTCGCATTGAGCAGCCGATCCCAATGGGATGGAATGCGTTCGTATACGTGCTAGAAGGCGACGGCGGAGTGTTCGGGAGTTCGAAATCGATGCCCATTGCACCACATCACCTTCTTTTGTTAGGGAATGGTGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTTAGGTTTATATTGGTTGGGGGGCAGCCATTGAATGAGAGTGTGGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAGATTGATCAAACCATTGAGGATTTTGAGAATTGTAAAAATGGCTTTGAGAGAGCAAGGCATTGGAGATCACTATCTTAA 654 44.95 MRHEDFKGNKGTIGAGDLQWMTAGKGIVHSEMPASHDTQRGLQLWINLSSKHKMIESRYQEIRSKDIVEATKDGVRVRVIAGEAFGAKSPIYTTTPTMYLDFTLDPRSRIEQPIPMGWNAFVYVLEGDGGVFGSSKSMPIAPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCKNGFERARHWRSLS 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19210210 19211256 + Tan0005741.3 Tan01g1797 739221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1797 217 CDD cupin_pirin_C 96 174 - -
Tan01g1797 217 Gene3D Jelly Rolls 1 179 IPR014710 -
Tan01g1797 217 PIRSF Pirin 1 214 IPR012093 -
Tan01g1797 217 Pfam Pirin C-terminal cupin domain 99 206 IPR008778 -
Tan01g1797 217 Pfam Pirin 1 46 IPR003829 -
Tan01g1797 217 SUPERFAMILY RmlC-like cupins 1 215 IPR011051 -
Tan01g1797 217 PANTHER PIRIN-RELATED 1 215 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1797 Tan-Chr1:19210210 Tan01g3147 Tan-Chr1:85019506 1.00E-92 dispersed
Tan01g1796 Tan-Chr1:19208511 Tan01g1797 Tan-Chr1:19210210 9.70E-126 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1797 K06911 - csv:101204082 366.311