Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1805 ATGATGCCTAGTGTCATGACAGATTCATCGGAGAAGGACTCAGAGCCGTTTGTAGAAGTGAATCCGACGGGTCGATACGGGCGGTACGGGGAGCTTCTCGGCTCGGGGGCGGTGAAGAAAGTTTATAGGGGATTTGATCAAGAAGAAGGAATTGAGGTGGCTTGGAACCAAGTGAAACTAAGGAGTTTTTCCAATGATCCATCCATGATTGATAGGCTATACTCGGAAGTGACTTTGTTAAGAACCCTAAAGAACAACAACATCATTGCCTTATACGATGTCTGGCTTGACAAACTTCATGGAACCCTAAATTTCATTACTGAGGTTTGTACAAGTGGGAACCTTAGAGAGTACAGGAAGAAACATAGGCAAGTGTCTTTGAAGGCTTTGAAGAAATGGTCCAAGCAAATTCTTAAGGGTTTGCATTATTTGCATACTCATGACCCTTGTGTTATTCATAGAGATCTCAATTGTAGCAACCTCTTTGTCAATGGCAATGTTGGCCAGGTGAAGATTGGTGACTTGGGTTTGGCAGCAACAGTGGGGAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCAGAATTCATGGCACCTGAGCTATATGAGGAGCATTACACAGAGCTTGTGGACATATATTCATTTGGAATGTGTTTGCTTGAATTGGTCACCTTGGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTACAGGAAAGTCTCCTCTGGAATTAAGCCTCAGGCCCTTGCCAAGGTCAAGGACCCTGAGGTTAGGGCTTTCATTGACAAGTGTCTTGCTCAGTCTCAAGCTCGGCCCTCCGCCGCCGACCTCCTCCTCGACCCCTTTTTTGGGGAAATTGATGATGACGAAAACGACGATGACAACAATGATCATTAG 903 44.96 MMPSVMTDSSEKDSEPFVEVNPTGRYGRYGELLGSGAVKKVYRGFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVTLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHTHDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVGKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYRKVSSGIKPQALAKVKDPEVRAFIDKCLAQSQARPSAADLLLDPFFGEIDDDENDDDNNDH 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19299309 19301463 - Tan0011874.1 Tan01g1805 739229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1805 300 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Tan01g1805 300 SUPERFAMILY Protein kinase-like (PK-like) 29 290 IPR011009 -
Tan01g1805 300 CDD STKc_WNK 25 285 - -
Tan01g1805 300 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Tan01g1805 300 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1805 300 MobiDBLite consensus disorder prediction 1 20 - -
Tan01g1805 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 286 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan01g1805 300 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1805 300 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Tan01g1805 300 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Tan01g1805 300 PIRSF TyrPK_CSF1-R 121 281 - -
Tan01g1805 300 PIRSF TyrPK_CSF1-R 26 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1805 Tan-Chr1:19299309 Tan01g3170 Tan-Chr1:85308391 1.00E-135 dispersed
Tan01g1805 Tan-Chr1:19299309 Tan01g1806 Tan-Chr1:19299309 1.00E-130 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67048 PF00069 Pkinase 1.60E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1805 K08867 - csv:101221172 534.643