Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g1806 ATGATTGATAGGCTATACTCGGAAGTGACTTTGTTAAGAACCCTAAAGAACAACAACATCATTGCCTTATACGATGTCTGGCTTGACAAACTTCATGGAACCCTAAATTTCATTACTGAGGTTTGTACAAGTGGGAACCTTAGAGAGTACAGGAAGAAACATAGGCAAGTGTCTTTGAAGGCTTTGAAGAAATGGTCCAAGCAAATTCTTAAGGGTTTGCATTATTTGCATACTCATGACCCTTGTGTTATTCATAGAGATCTCAATTGTAGCAACCTCTTTGTCAATGGCAATGTTGGCCAGGTGAAGATTGGTGACTTGGGTTTGGCAGCAACAGTGGGGAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCAGAATTCATGGCACCTGAGCTATATGAGGAGCATTACACAGAGCTTGTGGACATATATTCATTTGGAATGTGTTTGCTTGAATTGGTCACCTTGGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTACAGGAAAGTCTCCTCTGGAATTAAGCCTCAGGCCCTTGCCAAGGTCAAGGACCCTGAGGTTAGGGCTTTCATTGACAAGTGTCTTGCTCAGTCTCAAGCTCGGCCCTCCGCCGCCGACCTCCTCCTCGACCCCTTTTTTGGGGAAATTGATGATGACGAAAACGACGATGACAACAATGATCATTAG 699 43.63 MIDRLYSEVTLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHTHDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVGKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYRKVSSGIKPQALAKVKDPEVRAFIDKCLAQSQARPSAADLLLDPFFGEIDDDENDDDNNDH 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19299309 19301243 - Tan0011874.2 Tan01g1806 739230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g1806 232 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1806 232 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 218 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan01g1806 232 Gene3D Phosphorylase Kinase; domain 1 1 40 - -
Tan01g1806 232 PIRSF ILK 1 214 - -
Tan01g1806 232 Pfam Protein kinase domain 4 217 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g1806 232 Gene3D Transferase(Phosphotransferase) domain 1 42 222 - -
Tan01g1806 232 SUPERFAMILY Protein kinase-like (PK-like) 3 222 IPR011009 -
Tan01g1806 232 FunFam probable serine/threonine-protein kinase WNK9 42 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1806 Tan-Chr1:19299309 Tan01g3170 Tan-Chr1:85308391 2.50E-105 dispersed
Tan01g1805 Tan-Chr1:19299309 Tan01g1806 Tan-Chr1:19299309 1.00E-130 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67049 PF00069 Pkinase 1.60E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g1806 K08867 - csv:101221172 417.927